Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00059 ATGGCCCAAAATGATTCAAACCCTCCTCCTCCTCCAGCCGCTTCACCGCCTCAGGAGCCTCCGTCACTGTCATCGGAGAATGATGCCAAAGCTGACGATGTGGTTGAAGAGAAAGTGAAGGCTGAGGAGGTGCTTGTGGATGAAGAGAAAGGCAAAGAAAAAGAGGAAGTAAAAGGTGGTGAGGAGGCGGTTGTGGTTGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGATAAGGAGAAGGATAAGGAGAAAGAGAAAGAGAAAGAGAAAGAAGAAGAGGTTACAGGCGGAGAGACAGAGAGCGAGTCATTGAAGGAGGAGAGCAATAGGGTTTCTGATTCGGAGAGAAAGGGCATCGAAGAGCTGAAGAAGGCGCTGAGGGAAGAGTTGGAGAGGAAGGAGGAAGGCGAGGTTTCCATCTGGGGCGTCCCTCTCTTGAAGGACCAGAGGACTGACGTCATTCTTCTAAAGTTTCTGAGAGCGCGGGACTTGAAGGTGAAGGATGCTCTTGTGATGATTCAGAACACTCTCCGATGGAGGAAGGAGTTCGGCATCGAGGCGCTTTTGGAGGAAGATCTGGGAGAGGAGTTGGAGAAGGTGGTGTTCATGCACGGCCACGGAAGAGAGGGGCATCCCGTCTGTTACAACGTCTACGGAGAGTTCCAGAACAAGGAGCTGTACCAGAAGGCCTTCTCCACCGAGGAAAACCGAACAAAGTTTCTCCGATGGCGGATTCAGCTGTTGGAGCGCAGCATCAGGAACCTGGACTTCACTCCCGGAGGCATCAGCGCCATTTTCCAAATCAATGACCTCAAAAACTCTCCTGGCCCTGCCAAACGGGAACTTCGGCTTGCCACCAAACAAGCTCTGCAGTTGCTTCAGGACAACTATCCGGAGTTTGTTGCCAAACAGGTTTTCATCAATGTTCCTTGGTGGTATCTTGCATTCTATACCATGATCAATCCCTTCTTAACTCAGAGAACCAAAAGCAAATTTATCTTTGCCGGACCATCCAAGTCTCCCGACATTCTTTTCAAGTATATTTCTCCCGAGCAAGTGCCGGTTCAGTATGGTGGCCTCAGTGTAGATTTCTGTGACTGCAACCCCGATTTCACTACGTCTGATCCAGTCACCGAAATTTCTATAAAGCCAACCACTAAGCAAACTGTCGAAATTGCTATCTATGAGAAATGCATTATTGTTTGGGAGCTGCGGGTGGTGGGCTGGGAGGTTACCTACAATGCTGAATTCAAGCCTGATGCTAAAGATGCATATACAGTTGTCATACAGAAGGCCACAAAGATGTCCCCCACCGATGAACCAGTGGTTTCCAATAGCTTCAAAGTTGGTGAACTGGGGAAATTATTGCTCACCATAGACAATCCTACCTTGAAAAAGAAGAGGCTTCTTTACAGGTTCATGATCAAACCCTACTGTGATTGA 1452 0.4869 MAQNDSNPPPPPAASPPQEPPSLSSENDAKADDVVEEKVKAEEVLVDEEKGKEKEEVKGGEEAVVVEEKEKEKEKEKEKDKEKDKEKEKEKEKEEEVTGGETESESLKEESNRVSDSERKGIEELKKALREELERKEEGEVSIWGVPLLKDQRTDVILLKFLRARDLKVKDALVMIQNTLRWRKEFGIEALLEEDLGEELEKVVFMHGHGREGHPVCYNVYGEFQNKELYQKAFSTEENRTKFLRWRIQLLERSIRNLDFTPGGISAIFQINDLKNSPGPAKRELRLATKQALQLLQDNYPEFVAKQVFINVPWWYLAFYTMINPFLTQRTKSKFIFAGPSKSPDILFKYISPEQVPVQYGGLSVDFCDCNPDFTTSDPVTEISIKPTTKQTVEIAIYEKCIIVWELRVVGWEVTYNAEFKPDAKDAYTVVIQKATKMSPTDEPVVSNSFKVGELGKLLLTIDNPTLKKKRLLYRFMIKPYCD 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00059 483 Gene3D - 107 397 IPR036865 -
Phco9g00059 483 MobiDBLite consensus disorder prediction 29 119 - -
Phco9g00059 483 SUPERFAMILY CRAL/TRIO N-terminal domain 102 195 IPR036273 -
Phco9g00059 483 Coils Coil 63 97 - -
Phco9g00059 483 CDD SEC14 202 363 IPR001251 -
Phco9g00059 483 MobiDBLite consensus disorder prediction 1 19 - -
Phco9g00059 483 Pfam CRAL/TRIO domain 202 362 IPR001251 -
Phco9g00059 483 Pfam CRAL/TRIO, N-terminal domain 123 178 IPR011074 -
Phco9g00059 483 SUPERFAMILY CRAL/TRIO domain 203 373 IPR036865 -
Phco9g00059 483 PANTHER PATELLIN-1 68 480 IPR044834 GO:0008289
Phco9g00059 483 MobiDBLite consensus disorder prediction 1 119 - -
Phco9g00059 483 Coils Coil 119 142 - -
Phco9g00059 483 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 193 362 IPR001251 -
Phco9g00059 483 SMART sec14_4 198 365 IPR001251 -
Phco9g00059 483 SMART CRAL_TRIO_N_2 154 179 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00059 Phco-Chr9 405005 406749 Dispersed/Proximal