Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00053 ATGAACAAGCTGGTGGTAGAGGTTGTGGATGCAAGCGACCTCATGCCCAAAGACGGGGAAGGGTCAGCCAACCCCTTTGTAGAGGTAAAGTTTGATGAGCAGCAGCACAGTACTGAGAAAAAGCACAAAGACCTGAATCCTAATTGGAACCAGAAGCTGGTGTTCCACATCAATAACCCGAGAGATCTTGCGCAAAAGACAATTGAAGTGGTTGTATACAATCACAATGATCGGAACCACAACAACTTCCTTGGAAGGGTCAGACTTTCAGGCGCTTCCATCCCTCTATCGGAGTCCCAGGCCCGTGTGGAACGCTACCCACTTGAGAAACGTGGCCTCTTTTCAAACATCAGGGGAGATATTGCTCTCAAGTGTTATGCGCTGCATGATCCTCTTCCTCCCCCGCAACCCCTGGACGCCAGTGATGATCCTGCTGCTGCTGAACAACATCGCCCTCCCCCTCCCCCGGAGGAGGATCAGCACACTCCCCTGCAAGAAATAAACCCCAACATGGTGGTAGACGAGGAAAGCGTGGTTGGTGAAGGGGAGGAGAAGAAGAAGAAAATGAAAAAGAAAGAAAAGGAAGTGAGGACTTTTCACTCTATACCAGCTGCAGCTGCTGCACCAAAGGCCCAGTCCCAGTTCCAGGCGGCAGTGGAAACGGTGAGGAGGGCTGACTTCGCAAAGGCTGGACCACCGAATGTGATGTTGATGCAAATTCCAAAGCAAAACCCCCATTATGGACTGGAGGAGACAAGTCCTCCTCTGGCGGCTCGCTTGCGGTACAGAGTAGGGGACAAGATATCAACCACCTACGACTTGGTGGAACAGATGCATTACTTGTACGTTAATGTGGTGAAGGCAAGGGATCTCCCCGTGATGGATATCTCGGGAAGCCTTGACCCTTATGTGGAAGTCAAGCTCGGTAACTACAAGGGCCGCACCAAGCACCTGGACAAGAATCAGAACCCCGTTTGGAAGCAAATCTTTGCCTTCTCCAAGGAGAGGTTGCAATCAAATTTGCTTGAAGTGACGGTGAAGGACAAGGACATTGGCAAAGATGATTTTGTTGGGAGAGTTCTGTTTGATCTTACTGAGGTTCCTCTTCGGGTGCCCCCAGACAGCCCCTTGGCTCCTCAGTGGTACAGATTGGAGGACAAGAAAGGCCAAAAAGTTCACAACAATGGCGAAATCATGCTTGCAGTTTGGATGGGAACACAGGCCGACGAGTCCTTCCCGGAGGCCTGGCACTCTGACGCTCACAACGTCAGCCACTCTAATCTTGCAAACACTCGCTCAAAGGTATATTTCTCACCCAAGCTTTTCTATCTTAGAGTTCAAGTCATCGAAGCTCAGGATCTTGTTCCTTCCGACAAAGGAAGAGCCCCGGACGCTGTTGTTAGAGTACAGCTCGGGAACCAGATGAGATTCACCCGCCCTTCTCAATTGAGAAGCACCAACCCAGTTTGGAACGATGAGCTTATGTTTGTGGCTGCTGAGCCATTTGAGGATTTCATCATTGTGACTGTGGAGGACAAAGTAGGTCCTAGTGCTGAAATCTTGGGAAGGGAGATCATATCAGTTAGAAGTATTCCACCCAGACACGAGACCAGCAAGCTCCCTGATTCTCGTTGGTTCAATTTGCACAGGCCTAGTGCTGTCGGTGAGGAAGAAACGGAGAAAAAGAAGGAGAAATTCTCGAGCAAGATTCACCTCCGAATGTGTCTGGAGGCTGGGTACCATGTGCTGGATGAGTCCACGCCTTTCAGCAGTGATCTTCAGCCATCCTCCAAACATTTGAGGAAGAAAAACATTGGCATCCTCGAACTCGGGATACTGAGTGCCCGCAATTTGGTGCCCCTGAAGGGCAGGGAAGGTAGGAGCACCGATGCTTACTGCGTGGCCAAGTATGGCAACAAGTGGGTTCGAACCAGAACTCTGCTTGATACTCTCTCCCCTCGATGGAATGAGCAATATACGTGGGAAGTTTATGATCCATGCACTGTCATCACAATTGGGGTTTTTGACAACCACCACATCAATGGGAGCAGTGATGCAAGGGATCAGAGAATTGGAAAGGTAAGAATCCGGTTATCAACTCTGGAAACTGATAGGGTGTATACTCACTTTTATCCTCTGCTGGTCCTACAACCCAATGGCCTGAAGAAGAACGGAGAGCTTCACTTGGCCGTGAGATTCACATGCACGGCTTGGGTGAATATGGTAGCCCAGTATGGCAGGCCTTTGCTTCCCAAAATGCATTATGTCCAACCCATACCTGTTAGGCACATAGACTGGCTCCGCCACCAGGCCATGCAGATTGTGGCAGCTCGCCTATCTAGAGCTGAGCCACCCCTTAGGCGTGAAACAGTTGAGTATATGCTCGACGTTGATTACCATATGTGGAGTCTAAGGAGAAGCAAAGCCAATTTCGGTCGCATAATGTCAATCCTCAAAGGAGTTACAGCTGTTTGCAAATGGTTTGATGACATCTGCACCTGGAGAAACACAATCACAACCTGCATTGTTCACGTCCTGTTCTTGATACTGGTTTGCTATCCGGAACTGATATTGCCCACCATTTTCCTTTACTTGTTTGTAATTGGGATTTGGAATTACCGGTTCAGGCCAAGGCAACCACCCCATATGGATGCCAGGTTGTCACAGGCAGAGAATGCCCACCCAGATGAACTGGACGAGGAATTTGACACTTTTCCATCCACAAAACCTTCAGATATTGTGAGAATGAGGTATGACAGATTGCGGAGTGTGGCAGGTAGAGTACAGACTGTGGTTGGAGATTTGGCTACTCAGGGAGAAAGGGCTCAAGCCATACTAAATTGGAGAGACTCCAGGGCAACATCTATCTTCATCATCTTCTCGCTCATATGGGCCGTATTCATTTACATCACTCCCTTCCAAGTAGTGGCAATTCTCGTAGGCCTATATATGCTACGTCATCCTCGGTTTAGGAGCAAGATGCCATCAGTACCCGTTAATTTCTTCAAGAGATTGCCTTCCAGATCAGACACGCTTATATGA 3042 0.4905 MNKLVVEVVDASDLMPKDGEGSANPFVEVKFDEQQHSTEKKHKDLNPNWNQKLVFHINNPRDLAQKTIEVVVYNHNDRNHNNFLGRVRLSGASIPLSESQARVERYPLEKRGLFSNIRGDIALKCYALHDPLPPPQPLDASDDPAAAEQHRPPPPPEEDQHTPLQEINPNMVVDEESVVGEGEEKKKKMKKKEKEVRTFHSIPAAAAAPKAQSQFQAAVETVRRADFAKAGPPNVMLMQIPKQNPHYGLEETSPPLAARLRYRVGDKISTTYDLVEQMHYLYVNVVKARDLPVMDISGSLDPYVEVKLGNYKGRTKHLDKNQNPVWKQIFAFSKERLQSNLLEVTVKDKDIGKDDFVGRVLFDLTEVPLRVPPDSPLAPQWYRLEDKKGQKVHNNGEIMLAVWMGTQADESFPEAWHSDAHNVSHSNLANTRSKVYFSPKLFYLRVQVIEAQDLVPSDKGRAPDAVVRVQLGNQMRFTRPSQLRSTNPVWNDELMFVAAEPFEDFIIVTVEDKVGPSAEILGREIISVRSIPPRHETSKLPDSRWFNLHRPSAVGEEETEKKKEKFSSKIHLRMCLEAGYHVLDESTPFSSDLQPSSKHLRKKNIGILELGILSARNLVPLKGREGRSTDAYCVAKYGNKWVRTRTLLDTLSPRWNEQYTWEVYDPCTVITIGVFDNHHINGSSDARDQRIGKVRIRLSTLETDRVYTHFYPLLVLQPNGLKKNGELHLAVRFTCTAWVNMVAQYGRPLLPKMHYVQPIPVRHIDWLRHQAMQIVAARLSRAEPPLRRETVEYMLDVDYHMWSLRRSKANFGRIMSILKGVTAVCKWFDDICTWRNTITTCIVHVLFLILVCYPELILPTIFLYLFVIGIWNYRFRPRQPPHMDARLSQAENAHPDELDEEFDTFPSTKPSDIVRMRYDRLRSVAGRVQTVVGDLATQGERAQAILNWRDSRATSIFIIFSLIWAVFIYITPFQVVAILVGLYMLRHPRFRSKMPSVPVNFFKRLPSRSDTLI 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00053 1013 CDD C2D_MCTP_PRT_plant 607 730 IPR047255 -
Phco9g00053 1013 Gene3D C2 domain 1 130 IPR035892 -
Phco9g00053 1013 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 443 597 IPR035892 -
Phco9g00053 1013 ProSiteProfiles C2 domain profile. 262 382 IPR000008 -
Phco9g00053 1013 CDD C2C_MCTP_PRT_plant 443 595 IPR047258 -
Phco9g00053 1013 ProSiteProfiles C2 domain profile. 589 711 IPR000008 -
Phco9g00053 1013 MobiDBLite consensus disorder prediction 132 196 - -
Phco9g00053 1013 Pfam Plant phosphoribosyltransferase C-terminal 858 1012 IPR013583 -
Phco9g00053 1013 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
Phco9g00053 1013 SMART C2_3c 3 108 IPR000008 -
Phco9g00053 1013 SMART C2_3c 280 376 IPR000008 -
Phco9g00053 1013 SMART C2_3c 607 710 IPR000008 -
Phco9g00053 1013 SMART C2_3c 443 540 IPR000008 -
Phco9g00053 1013 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 144 IPR035892 -
Phco9g00053 1013 CDD C2B_MCTP_PRT_plant 280 406 IPR047257 -
Phco9g00053 1013 FunFam C2 domain-containing protein 589 737 - -
Phco9g00053 1013 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 606 739 IPR035892 -
Phco9g00053 1013 Pfam C2 domain 280 382 IPR000008 -
Phco9g00053 1013 Pfam C2 domain 443 548 IPR000008 -
Phco9g00053 1013 Pfam C2 domain 3 102 IPR000008 -
Phco9g00053 1013 Pfam C2 domain 606 713 IPR000008 -
Phco9g00053 1013 Gene3D C2 domain 425 576 IPR035892 -
Phco9g00053 1013 Gene3D C2 domain 588 735 IPR035892 -
Phco9g00053 1013 Gene3D C2 domain 266 404 IPR035892 -
Phco9g00053 1013 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 3 1012 IPR047259 -
Phco9g00053 1013 ProSiteProfiles C2 domain profile. 422 546 IPR000008 -
Phco9g00053 1013 FunFam C2 domain-containing protein 275 421 - -
Phco9g00053 1013 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 280 420 IPR035892 -
Phco9g00053 1013 MobiDBLite consensus disorder prediction 178 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00053 Phco-Chr9 373826 376867 Dispersed/Transposed