Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco9g00050 | ATGCCCCAATTTGTAAATTTTCGGCTTTTCCCGCGCTTCCGCGCACTCAAAACCCTTCCTTTCTCCACCCACCGAATGGGCATGGCCGATACCCTCTGTACCCATCTCCACCAAAGCAATGGCAGTGTTGAGAACTCGTTGTCCAAGGTTAAGCCTAAACTCGACTCTCGATGTGTCATCCAGGTCCTCAACTCCTGTCATCCCAAGCAACTTCTATTGGGTGTCAGATTTTTCGTTTGGGCTGGATTTCAATCTGGCTACAGGCACAGTGCTTACACCTACAGCAAAGCTTGCAAATTGCTAGGGATTCAACAAAATCCCCAAATTATTCGTGATGTCGTCCTGTCTTACGAGGCTGAAGGGTGTTCAGTCACTGTCAACATGTTCAGGGAGGTTCTGAAGCTGTGCAAAGAAGCTCAGCTACCTGACGTGGCATTGTGGGTGTTGAGGAAGATGGAGCAGAGTTTCAACATCCGTGCTGACACTGTGATGTATAATGTGGTTATTAGGCTGTGTTGCAAGAATGGCGACATTGAAACGGCTGAGAAGTTGACCGGGGAGATGAGTTTGAATGGTCTTTATCCTGATCTTATTACGTACATGGCAATAGTGGAGGGATTCTGTAATGCGGGTCGACCCGAGCATGCTTATTCTGTGCTTAAGGTTATGAGACTGCATAGATGTTCGCCCAATTTGGTCCTTTTATCAGCCATTTTAGACGGCTTGTGTAAGTCTGGATCTATGGAAATGGCATTGGAGTTGTTGGATGAAATGGAGAAAGGTGGGGATTGTAGTCCAAATGTTGTTACTTATACATCTGTGATTCAAAGTTTCTGTAAGAGAGGTCAGTGGGCGGAAGCATTGGATATTCTGGATAGAATGAAATCTTTGGGGTGCCATGCAAATCATGTTACTGTTTTTACTTTGGTTGATAGCCTTTGTGTTGAAGGTCGTGTAGGAGAAGCTTACAAGTTGATTGATAAGTTTGTGGTGGAACACGGTGTTTCTTATGGTGATTGTTGCAGTTCACTTGTGATTTCTTTGATAAGGATTAAAAACCTGGACGAAGCAGAGAAGCTCTTCATGGAAATGCTTTCTGGTGATGTCAGACCTAATAGTTTGGCATCTAGCCTATTGCTGAAGGAGCTTTGTATGAAGGACCAGGTATTGGATGGATTCCACATGCTTGAAGCAATTGAGAATAAAGGATATTTGTCTACCATTGAATATGGTATTTATTCAATTCTTTTAGTTGGCCTTTGTCAAAGAAACCACCTGACGGAGGCCACAAAGTTGGCCAAGATAATGCTTAAGAAATCAGTTCCGCTGCAACCTCCGTACAAAGATGGTGCAATCGATATCCTTATAAACTCTGGAGAAAAAGATCTTGTGAACCAGTTGACTGGCATTCGTAAGGGGCTTTGA | 1425 | 0.4386 | MPQFVNFRLFPRFRALKTLPFSTHRMGMADTLCTHLHQSNGSVENSLSKVKPKLDSRCVIQVLNSCHPKQLLLGVRFFVWAGFQSGYRHSAYTYSKACKLLGIQQNPQIIRDVVLSYEAEGCSVTVNMFREVLKLCKEAQLPDVALWVLRKMEQSFNIRADTVMYNVVIRLCCKNGDIETAEKLTGEMSLNGLYPDLITYMAIVEGFCNAGRPEHAYSVLKVMRLHRCSPNLVLLSAILDGLCKSGSMEMALELLDEMEKGGDCSPNVVTYTSVIQSFCKRGQWAEALDILDRMKSLGCHANHVTVFTLVDSLCVEGRVGEAYKLIDKFVVEHGVSYGDCCSSLVISLIRIKNLDEAEKLFMEMLSGDVRPNSLASSLLLKELCMKDQVLDGFHMLEAIENKGYLSTIEYGIYSILLVGLCQRNHLTEATKLAKIMLKKSVPLQPPYKDGAIDILINSGEKDLVNQLTGIRKGL | 474 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco9g00050 | 474 | Gene3D | Tetratricopeptide repeat domain | 335 | 470 | IPR011990 | GO:0005515 | |
| Phco9g00050 | 474 | Gene3D | Tetratricopeptide repeat domain | 189 | 259 | IPR011990 | GO:0005515 | |
| Phco9g00050 | 474 | Gene3D | Tetratricopeptide repeat domain | 260 | 331 | IPR011990 | GO:0005515 | |
| Phco9g00050 | 474 | Gene3D | Tetratricopeptide repeat domain | 31 | 188 | IPR011990 | GO:0005515 | |
| Phco9g00050 | 474 | PANTHER | TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED | 140 | 431 | - | - | |
| Phco9g00050 | 474 | NCBIfam | pentatricopeptide repeat | 269 | 302 | IPR002885 | - | |
| Phco9g00050 | 474 | NCBIfam | pentatricopeptide repeat | 236 | 268 | IPR002885 | - | |
| Phco9g00050 | 474 | NCBIfam | pentatricopeptide repeat | 340 | 372 | IPR002885 | - | |
| Phco9g00050 | 474 | NCBIfam | pentatricopeptide repeat | 198 | 231 | IPR002885 | - | |
| Phco9g00050 | 474 | NCBIfam | pentatricopeptide repeat | 163 | 196 | IPR002885 | - | |
| Phco9g00050 | 474 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 196 | 230 | IPR002885 | - | |
| Phco9g00050 | 474 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 267 | 301 | IPR002885 | - | |
| Phco9g00050 | 474 | Pfam | PPR repeat family | 230 | 280 | IPR002885 | - | |
| Phco9g00050 | 474 | Pfam | PPR repeat family | 161 | 209 | IPR002885 | - | |
| Phco9g00050 | 474 | Pfam | PPR repeat | 298 | 328 | IPR002885 | - | |
| Phco9g00050 | 474 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 161 | 195 | IPR002885 | - | |
| Phco9g00050 | 474 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 231 | 265 | IPR002885 | - | |
| Phco9g00050 | 474 | SUPERFAMILY | TPR-like | 268 | 366 | IPR011990 | GO:0005515 | |
| Phco9g00050 | 474 | Pfam | PPR repeat | 341 | 366 | IPR002885 | - | |
| Phco9g00050 | 474 | Pfam | PPR repeat | 412 | 440 | IPR002885 | - |