Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03337 ATGGGTAGTTGTGGAAGGGAAGGTGTAGTGAGACAGTATATAAGATCAAAAGTCCCTCGTTTAAGATGGACCCCTGAACTGCATCGTTGCTTTGTTTATGCCATTGAAACTCTCGGAGGTCATCAGAAGGCTACTCCTAAGCTTGTTCTTCAATTGATGGATGTTAAAGGGCTCACAATTTCCCATGTCAAGAGCCATCTGCAGATGTACAGAAGCATGAAAGGTGATTCCTGCAGACAAGACAAGACTTCCACCCAACATAGAAAACAATCTTTTCAGGAGCATGATGATGAAGAGGGTGATGTTGGTTTTCACTCTTGCTTAAAATCCATTGGAAAAGAATCTGATTCCCAGTCCAGTTGCAGTAATTTCACCCTAAAAAGAGCTAGAATCGAGAAGACAAGTTTATTCTCAGGATTCCCACATTGCAGCCAAAGAATATGTGAAGCAGTCCCAAATCCATACTCTACTTTTTATGATTACCTGCAGAGCATGGCTGAGCAGAAGGGAATAAAGAAGATTTGTGCTGGTTCAATATTGCAGACTCAACCCCTTTCCACAACCTTTCTTCCCATGCTACCAAGGCAAGAATCAGATTTGCTCCAGGTTGCACATTTAAATGATAAACAGCCTTTGAATGAAGTTGAGAACAGTTGTAGGGTACAATCAGAGGATGAAAACATGGGAGGTTGTGAGTTGTCATTGTCCATCTCATTGCCACAGCCACATCCTTCTTCACAGAAAAGTAATGCTTCTTCAGTCAGCGAGATCAGTGAGGCCTTTTCATTATGCCCTAAGTTTAACACCACCAACAACAACAACTACATGGGCTGTTCTAGTTCTTCTAATGTTCCAAACACAGTTAATGTGGACCTATCTTTGGCCATTTGA 891 0.4175 MGSCGREGVVRQYIRSKVPRLRWTPELHRCFVYAIETLGGHQKATPKLVLQLMDVKGLTISHVKSHLQMYRSMKGDSCRQDKTSTQHRKQSFQEHDDEEGDVGFHSCLKSIGKESDSQSSCSNFTLKRARIEKTSLFSGFPHCSQRICEAVPNPYSTFYDYLQSMAEQKGIKKICAGSILQTQPLSTTFLPMLPRQESDLLQVAHLNDKQPLNEVENSCRVQSEDENMGGCELSLSISLPQPHPSSQKSNASSVSEISEAFSLCPKFNTTNNNNYMGCSSSSNVPNTVNVDLSLAI 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03337 296 MobiDBLite consensus disorder prediction 76 100 - -
Phco8g03337 296 FunFam Myb family transcription factor 17 75 - -
Phco8g03337 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Phco8g03337 296 SUPERFAMILY Homeodomain-like 17 73 IPR009057 -
Phco8g03337 296 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Phco8g03337 296 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 15 113 IPR044847 GO:0000976|GO:0006355|GO:0010158
Phco8g03337 296 Gene3D - 18 74 - -
Phco8g03337 296 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 73 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03337 Phco-Chr8 47959687 47964402 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco8g03337 Myb_DNA-binding 1.5e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g03337 8 47959687 47964402 Phco8g03337 8 47959687 47964402 ECH