Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03201 ATGAATTACCATTTCCAGTTTTCTGCAGAGAGAAAGACCGCCATGTCCAAACCCAACTCTTTCTTTCACAATCTCGTCAAGCCCTTCAAATTCAACTCCAGTAAAGAGGAACATAGCGAAGACGATGTACAGAACTTAGCTGCACAGGAGAACAAGGTCTTCCCTTACGAAACATTGGTCGCTGCTACAAACAAATTTAACATTCTTAACAAGCTTGGTGAGGGAGGATTTGGACCCGTCTTTAAGGGGAAATTGAGTGACGGGAGAGAGATTGCAGTGAAGAGGTTATCGCGTAGATCGAATCAAGGGAAGACGCAGTTCATTAACGAGGCCAAGTTGTTGGGTCGTGTGCAGCACCGAAATGTGGTGAATCTGATCGGTTACTGCGCCCATGGCTCCGAGAAACTTCTTGTTTATGAGTATGTCCCTCGCAAGAGCCTTGACAAGCTTCTCTTCAAATCGGGGAAGAAAGAAGAGCTAAACTGGAAACGTAGATTTGACATCATCAGTGGGGTGGGAAGGGGTTTGCTTTATCTTCACGAAGACTCTCACAACTGCATAATCCATCGCGACATAAAGGCCAGTAACATCTTACTCGATGAAAAATGGGTGCCAAAGATAGCAGATTTTGGTCTCGCCCGACTCTTCCCCGAAGACCAAACCCATGTCAACACACGTGTGGCTGGAACCAACGGGTATTTGGCTCCAGAATATTTAATGCATGGCCATTTATCTGTGAAGGCAGACGTATTTAGCTTTGGAGTTTTGGTGTTGGAATTGGTCAGTGGCCAGAGAAATTCATCGTTTGATACGAACATGAGTGCGCAGAATCTCCTCGACTGGGCATACAGGCTATACAAGAAAGGAAGGGCCATGGAAATGGTGGACCCTGCATTGGGGTCTTCAGTGATAACTGAACAAGTTGAAATGTGCATTAAACTGGGTCTCTTGTGCACTCAAGGTGATCCAAACCTCCGTCCAACCATGGGACGTGTGGCGGTGATGCTGTCAAAGAAACCGGACCACATGGAAGAACCAACAAGACCAGGAATGCCTGGTTCCAGATTCAGAAGAGTGCCTCGCAGACCCTCTGCAATGTTTTCTTCTGGGGTTGATGATGACTCTAATTCTCACACTTGTGATTCAAGCAACTATGGCACTAATAATAATACTACTTCTGCAACATCATCAACAACAACATCAAGCTCCACTGCTACTGCACAAGTAGATCCCCGAGGGAAACGACCAATGCAAGACTAG 1260 0.4611 MNYHFQFSAERKTAMSKPNSFFHNLVKPFKFNSSKEEHSEDDVQNLAAQENKVFPYETLVAATNKFNILNKLGEGGFGPVFKGKLSDGREIAVKRLSRRSNQGKTQFINEAKLLGRVQHRNVVNLIGYCAHGSEKLLVYEYVPRKSLDKLLFKSGKKEELNWKRRFDIISGVGRGLLYLHEDSHNCIIHRDIKASNILLDEKWVPKIADFGLARLFPEDQTHVNTRVAGTNGYLAPEYLMHGHLSVKADVFSFGVLVLELVSGQRNSSFDTNMSAQNLLDWAYRLYKKGRAMEMVDPALGSSVITEQVEMCIKLGLLCTQGDPNLRPTMGRVAVMLSKKPDHMEEPTRPGMPGSRFRRVPRRPSAMFSSGVDDDSNSHTCDSSNYGTNNNTTSATSSTTTSSSTATAQVDPRGKRPMQD 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03201 419 SUPERFAMILY Protein kinase-like (PK-like) 51 356 IPR011009 -
Phco8g03201 419 MobiDBLite consensus disorder prediction 337 419 - -
Phco8g03201 419 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 34 398 - -
Phco8g03201 419 MobiDBLite consensus disorder prediction 369 409 - -
Phco8g03201 419 CDD STKc_IRAK 72 338 - -
Phco8g03201 419 SMART serkin_6 66 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g03201 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Phco8g03201 419 FunFam Cysteine-rich receptor-like protein kinase 10 30 141 - -
Phco8g03201 419 FunFam Cysteine-rich receptor-like protein kinase 10 143 348 - -
Phco8g03201 419 Pfam Protein kinase domain 67 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g03201 419 Gene3D Transferase(Phosphotransferase) domain 1 142 348 - -
Phco8g03201 419 ProSiteProfiles Protein kinase domain profile. 66 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g03201 419 Gene3D Phosphorylase Kinase; domain 1 28 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03201 Phco-Chr8 46717258 46721799 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco8g03201 Pkinase 2.7e-49 CL0016