Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03181 ATGTCGGCAGCGTCGCCGTCTCCGGCGGCATCCGCGGCTTCGCCACCGCCACAGACACCACCCTCCTCCAACACTAGTCCCTCACCGTCCAACACCACCACTCCTCCGCCGCAACAAACCCCTTCTTCCACTTCTCCGCCGCAACAACCAGCTTCCCCGCCTCCGCTAACCCCATCTCCGGCGTCTCCACCGCCGTCACCGCCATCTTCTCCGCCGTCACCGCCTCCTAGTTCTTCACCTCCCCCCGTGTCTGGAACACCACCTCCTTTAGTACCTCCAACCTCACCACCGCCATCTCCGCCGCAGCCATCTCCTCCTCCTCCGCCTTCTCCGGATGCACCGCCACCGGTGACACCGAGCTCTCCACCTCCACCGCCACCATCAGCACCAGTTCCATCAAGAAGCCCTCCGCCACCGCCAACACCATCAAACCCTCCTAATAACACATCTCCACCACCATTACCACCACCCCCACAACCATCACCATCAGCGCCACCACCTAACAACACCCCACCACTTCCGCCACGAAATTCACCACCTCCTCCGGCCACCACGTCGCCCCCAGCCTCGCCACCACGAAATTCACCACCTGCTCCGGCTGCACCGCCCCCCAGTAACTCAACTAGGTCGCCGCCGCCGGTAAATTCGCCTCCACCAGCAGTGCATGCGCCGCCACCGAGGTCATCGCCGCCGCCAGCACCTGAACCCTCGAATCCTCCTTCTAGGATTAGTCCTCCTCCCACGCCAAGTTCCTCACCAGCTCCACCTTCAAATTCTACGCCAAGCTCATCACCTCCATCACCACCTTCAGTTACTCCATTGGCCCCGTCACCGCCATCTCCGCCTCCCAATGGTACAGCAGACTCAACCTCTGGTGGAGCTGGAATTGGCACTGCTGGTGTAGTGGCTATTAGTGTGGTGGGTGGATTTCTGCTTCTTGGCTTCATCGGTGTTCTTATATGGTGCATGAGGAGGCAAAAGAGAAAGATTCCTGTGAATGGTGGTTATGTCATGCCATCTACTCTGGCCTCCTCTCCTGAATCAGATTCATCCTTTTTCAAGACACACTCCTCAGCTCCTCTTGTACAAAGTGGCTCTGGCAGTGATGTTGTGTACACACCATCTGATCCTGGTGGACTAGGCCACTCAAGGTCATGGTTTTCATATGAAGAACTAATCAAGGCCACAAATGGCTTCTCAAGTCAAAATCTTTTGGGTGAGGGGGGATTTGGTTGTGTGTATAAAGGACACCTTCCTGATGGAAGAGAGATAGCAGTGAAAGAACTGAAGATTGGTGGAGGTCAGGGAGAGAGAGAATTCAAAGCTGAAGTAGAAATTATCAGTCGAATACATCATCGCCATTTGGTTTCTTTAGTGGGATACTGCATTGAAGACAACAGAAGACTACTTGTCTATGACTACGTTTCTAATGATACCCTTTACTTCCATCTACATGGGGAAAGCCAGCCTGTGCTAGAATGGGCAAACCGTGTTAAAATTGCAGCTGGTGCAGCCCGAGGACTAGCTTATCTCCATGAAGACTGCAACCCTCGGATCATTCACAGGGATATCAAGTCTTCAAACATTCTTTTAGATTTCAATTATGAAGCTAAGGTCTCAGATTTTGGGCTAGCCAAATTAGCTCTTGATGCAAACACACATATTACCACCCGTGTCATGGGAACTTTTGGGTATGTTGCCCCTGAATACGCTTCAAGTGGCAAATTGACTGAGAAGTCTGATGTATATTCTTTTGGAGTCGTGCTTTTGGAGCTAATTACCGGACGGAAGCCTGTAGATGTATCCCAACCTTTGGGAGATGAAAGCCTGGTTGAATGGGCTCGGCCTTTACTGAGTCAGGCAATAGATACTGAGGAATTCAACAGTTTGGCAGATCCAAGGCTGGAAAAGAATTATACTGAGAGTGAATTGTATTGCATGATTGAGGTTGCTGCAGCTTGTGTGCGGCATTCAGCTTCAAAGAGACCTCGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGGAGGTTCTGATCTAACTAATGGAATGCAACTTGGGGAAAGTGAGGTGTTTGACTCTGCACAACAATCTGAAGAAATAAGATTATTTCGGAGGATGGCATTTGGTAGTCAAAATTACAGCACAGACTTCTTTAGCCGTGCTAGTATGAATCCATGA 2181 0.5135 MSAASPSPAASAASPPPQTPPSSNTSPSPSNTTTPPPQQTPSSTSPPQQPASPPPLTPSPASPPPSPPSSPPSPPPSSSPPPVSGTPPPLVPPTSPPPSPPQPSPPPPPSPDAPPPVTPSSPPPPPPSAPVPSRSPPPPPTPSNPPNNTSPPPLPPPPQPSPSAPPPNNTPPLPPRNSPPPPATTSPPASPPRNSPPAPAAPPPSNSTRSPPPVNSPPPAVHAPPPRSSPPPAPEPSNPPSRISPPPTPSSSPAPPSNSTPSSSPPSPPSVTPLAPSPPSPPPNGTADSTSGGAGIGTAGVVAISVVGGFLLLGFIGVLIWCMRRQKRKIPVNGGYVMPSTLASSPESDSSFFKTHSSAPLVQSGSGSDVVYTPSDPGGLGHSRSWFSYEELIKATNGFSSQNLLGEGGFGCVYKGHLPDGREIAVKELKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIEDNRRLLVYDYVSNDTLYFHLHGESQPVLEWANRVKIAAGAARGLAYLHEDCNPRIIHRDIKSSNILLDFNYEAKVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDVSQPLGDESLVEWARPLLSQAIDTEEFNSLADPRLEKNYTESELYCMIEVAAACVRHSASKRPRMGQVVRAFDSLGGSDLTNGMQLGESEVFDSAQQSEEIRLFRRMAFGSQNYSTDFFSRASMNP 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03181 726 SUPERFAMILY Protein kinase-like (PK-like) 381 670 IPR011009 -
Phco8g03181 726 FunFam proline-rich receptor-like protein kinase PERK8 475 686 - -
Phco8g03181 726 ProSitePatterns Protein kinases ATP-binding region signature. 405 427 IPR017441 GO:0005524
Phco8g03181 726 PRINTS Proline rich extensin signature 64 81 - -
Phco8g03181 726 PRINTS Proline rich extensin signature 6 18 - -
Phco8g03181 726 PRINTS Proline rich extensin signature 25 46 - -
Phco8g03181 726 PRINTS Proline rich extensin signature 47 63 - -
Phco8g03181 726 FunFam Proline-rich receptor-like protein kinase PERK8 372 474 - -
Phco8g03181 726 MobiDBLite consensus disorder prediction 1 292 - -
Phco8g03181 726 Pfam Protein tyrosine and serine/threonine kinase 402 671 IPR001245 GO:0004672|GO:0006468
Phco8g03181 726 SMART serkin_6 399 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g03181 726 CDD STKc_IRAK 405 675 - -
Phco8g03181 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Phco8g03181 726 ProSiteProfiles Protein kinase domain profile. 399 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g03181 726 Gene3D Transferase(Phosphotransferase) domain 1 475 685 - -
Phco8g03181 726 Gene3D Phosphorylase Kinase; domain 1 379 474 - -
Phco8g03181 726 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 312 707 IPR047117 -
Phco8g03181 726 MobiDBLite consensus disorder prediction 10 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03181 Phco-Chr8 46502743 46506904 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Phco8g03181 PK_Tyr_Ser-Thr 1.1e-44 CL0016