Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03028 ATGATAGAATCCCTCATGATAGAGTCCAGTAGGAATGGTATCACTAGTTGTGTACTACTGCACCTCTTTTTGTTTTTACCATTCATCCATTTAATCACTTGTGATCCAATTAATGTCCCGGACAAAATCCTCCTAAACTGTGGTTCTTATGAAGCATCATCATTCAATGGAGAAAATTGGATAGGAGATAGCGGATCTAATTTCTTGCCCCCAGAGTATGACAAGAGCTCATCTACAGTCTTGCTCTCAAACATAGAAGACTCTGTAGCCCCAAAAGTTCCATTCTCAACAGCAAGAATAACTCATTCTCCATTGACCTACTCCTTCCCTTTCTCCCCTGGCCTTAAATTCATTCGCCTTTACTTTCTCTCATCTTTATATCTGATTATGAACCCCTCCAACAAGGCTTATTTCTCTGTAAAAGCTGGGCCTTACACTCTTGTAAGTGATTTTAATCCATCTGTTTTTGCAGAAGAGCTCAACTCGAAGCTTTTCACCAAGGATTTCTTAGTCAATGTTAGGGAAGACAAACTGACTATTACATTTACTCCATCTCCTTTAATTTCCAAAGCATTTGCTTTTGTAAATGGCATTGAGATATTCCCCGTGCCCAAAAGTATATACTTTCCGGGTTCCAAGGTTCCTGTTCCTTACCTTGGGCACCAGCAAATTTTATTGACTAATGATGAATATGCTCTAGAGATGTTTTACAGAGTTAGCATTGAAGCTGATTCTCAAAATGCTTTTGGAATATGGTTAGATGATTTTAGATACATATCTGGTTCAGACTATGGAAATGTCCTCAATATAGAGTCTCGTACTGTTAGCATGAATTACACCACTTTTTATTCAAAGGATTACAATTATTCAGCACCATTAGAGCTGTATTGGACTGCCAGGACAATGGGTAATGATAACACGAAGTACAATTTAACATGGTCTTTCCCTGTTGATTCTGGATTCAAATACCTTGTTAGGCTTCATTTCTGTGAGATCTCTACGGGGGTAACGCAGCCCAATCAAAGGGTGTTCAAAGTGTACATAAACAACCAAACAGCAGAGGAGAGAATGGACGTAGTTGCTTCTGCCGGAGCACCATTTACTCCTTTGCAAAAGGACTATATTGTTATGGTTCCTATGGAAAGTGGGAGCAGGAAAGATTTGTGGATCTCTCTTCACCCTAACCTGGAGTCAAAACCAAAATATGCCGACGCCATACTGAATGGGATTGAGATCATGAAGATAAGTGACAGTAATCATAGTCTGGCAGCAATGTTCCAACTGGGAAGGGAACAAAGAAAGAAGGTTCAACATGTCATTATTGTGGCCGTTGCTACTTTAGGTACCATCTTGGGACTGCTCTTCACACTTTTCATTCTTATCCACAGAGCAGGGAAAAAATTGAAGTGGAGAATTTCTCATATACTCCCATCAAATTCTAGTAGTACTCACAAAATCATTCAACCCACAGTAACCTCAGGTCTTTGCCATCAATTCACACTTGCAGAAATCAGCATAGCTACAAGCAACTTCAGTGAAGCTCTAGTCATCGGGGAGGGAGGCTTCGGAAAGGTGTACAGAGGCATCATGCATCATGATGGAATCATTGCTGTTGCAGTAAAGCGCTCTATTCGTAGTTCTGGCCAAGGATATAAAGAGTTTCAAAATGAGATCAATTTTTTCTCATTCTGTCACATGAATCTAGTCTCACTGCTAGGGTACTGCCAAGAGGGAAATGAAATGATACTTGTGTATGAATACATGGCTGAGGGTCCTCTGTCTGACCACTTATACAAGAAAAAAAAACAGCCATTGCCTTGGATTCAAAGAATAAAGATTTGTATTGGTGCAGCCAGAGGACTACATTACCTCCACACTAGCACAAGGCACCCAGTGATTCACCGTGATGTGAAGTCAGCCAACATATTATTGGATCAGAATTGGGTAGCCAAGATTGCAGATTTTGGGTTGTGTAGAACAGTTCCCTCACTTTACCACTCACATGTTAGCACTGAGGTTAAAGGTACTTTTGGATATTTAGACCCTGAGTACTATAAGAGAAGAAAACTGACTCAAAAATCTGATGTGTATTCATTTGGAGTGGTTTTATTTGAGGTGTTGTGTGGAAGAGCAGCTGTGAATACTGTGGCAGTGGAAGAGGAAAGTGAGAAAGTTGGGCTGGCCACATGGGCCATGCACTGTTACAAGTGTGGAAGCATTGATGAATTAGTTGATCCTCATTTAGCAGGGAATGTTAGGCCAGAATGCCTGAGGGCGTTTGTGGAGATAGGCATCCAGTGCTTGGCTGATAGAAGTGCAGATAGGCCAACTATGGGAGAGGTCCTCAATAGTTTAGAGAGGATCCTTTCCTTGCACGATAGTTTAGAGGAACAAGAAGCTAATACAACTCAGTTTCTAAAATAG 2424 0.408 MIESLMIESSRNGITSCVLLHLFLFLPFIHLITCDPINVPDKILLNCGSYEASSFNGENWIGDSGSNFLPPEYDKSSSTVLLSNIEDSVAPKVPFSTARITHSPLTYSFPFSPGLKFIRLYFLSSLYLIMNPSNKAYFSVKAGPYTLVSDFNPSVFAEELNSKLFTKDFLVNVREDKLTITFTPSPLISKAFAFVNGIEIFPVPKSIYFPGSKVPVPYLGHQQILLTNDEYALEMFYRVSIEADSQNAFGIWLDDFRYISGSDYGNVLNIESRTVSMNYTTFYSKDYNYSAPLELYWTARTMGNDNTKYNLTWSFPVDSGFKYLVRLHFCEISTGVTQPNQRVFKVYINNQTAEERMDVVASAGAPFTPLQKDYIVMVPMESGSRKDLWISLHPNLESKPKYADAILNGIEIMKISDSNHSLAAMFQLGREQRKKVQHVIIVAVATLGTILGLLFTLFILIHRAGKKLKWRISHILPSNSSSTHKIIQPTVTSGLCHQFTLAEISIATSNFSEALVIGEGGFGKVYRGIMHHDGIIAVAVKRSIRSSGQGYKEFQNEINFFSFCHMNLVSLLGYCQEGNEMILVYEYMAEGPLSDHLYKKKKQPLPWIQRIKICIGAARGLHYLHTSTRHPVIHRDVKSANILLDQNWVAKIADFGLCRTVPSLYHSHVSTEVKGTFGYLDPEYYKRRKLTQKSDVYSFGVVLFEVLCGRAAVNTVAVEEESEKVGLATWAMHCYKCGSIDELVDPHLAGNVRPECLRAFVEIGIQCLADRSADRPTMGEVLNSLERILSLHDSLEEQEANTTQFLK 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03028 807 SUPERFAMILY Protein kinase-like (PK-like) 482 785 IPR011009 -
Phco8g03028 807 Gene3D Transferase(Phosphotransferase) domain 1 588 806 - -
Phco8g03028 807 CDD STKc_IRAK 517 788 - -
Phco8g03028 807 FunFam FERONIA receptor-like kinase 42 204 - -
Phco8g03028 807 FunFam Receptor-like protein kinase FERONIA 588 806 - -
Phco8g03028 807 SMART serkin_6 511 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g03028 807 Pfam Malectin-like domain 45 415 IPR024788 -
Phco8g03028 807 FunFam FERONIA receptor-like kinase 231 416 - -
Phco8g03028 807 ProSiteProfiles Protein kinase domain profile. 511 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g03028 807 PANTHER OS07G0166700 PROTEIN 496 792 IPR045272 GO:0004714|GO:0006468
Phco8g03028 807 Gene3D - 234 416 - -
Phco8g03028 807 Gene3D - 43 203 - -
Phco8g03028 807 Gene3D Phosphorylase Kinase; domain 1 473 587 - -
Phco8g03028 807 ProSitePatterns Protein kinases ATP-binding region signature. 517 541 IPR017441 GO:0005524
Phco8g03028 807 Pfam Protein tyrosine and serine/threonine kinase 516 784 IPR001245 GO:0004672|GO:0006468
Phco8g03028 807 FunFam receptor-like protein kinase FERONIA 475 587 - -
Phco8g03028 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03028 Phco-Chr8 44532063 44534486 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco8g03028 Malectin_like 3.5e-33 CL0202