Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g03027 ATGCAGAGAATTATGAACGCTTTCATATGCTCTGGGTACATTTTTATCCTGTATCTCTTAAACTTACAACTAGTTGCAGTTGCTGATAATGGCAGTTATGTTCCTACAGAGAACATAGTTCTCAACTGCGGCTCTAGCACATCAGAATTTGTACAATATGATGGCAGGAATTGGAGTGGTGACATTGTTTCACCGTATGTTCCCTCTAATGCTGACACCAAGTCCCTGGTAGTGAGAGCCACCAACACTCTTCAATCTATTCCTCAAGTTCCCTATATGACTGCAAGGATCTTTCACTCTCAATTCACCTACACTTTCAATGTAACCCCAGGTCCCAAATTCATTCGCCTTCACTTCTACCCAGCTTCCTACACGGATCTCAACATCTCAAATGCTTTCTTATCAGTAAGTGCTGCTAACTTCACTCTTCTCCACAACTTCAGTGCTTCCCTCAACGCTGATTACTACAACTTGGCCTATTTCATGAAAGAATTCATTGTGCATGTAAGTGGAAGTGTTTTGCAACTCACTTTCTCCCCATCATATAATGCCTCTCGTGCCTTTGCATTTGTGAATGGGATTGAAATTGTTTCAATGCCACTTAATTTATACATGAGGGGTGATGATGGTGATCCTCTTCCCTTAGTTGGACACGATAACAAAGTTGTGAACATTTATAATGACTCTGCCATGGAGACCTTGTACAGAGTGAATGTAGGAGGTGAGCAAATCCCATCCAAATATGACACGGGCATGTTTCGGACTTGGGACACCGATGAAGTTTACATTTTTGGGGCTGATTTTGGTATTCAACCCTGTAATATGAGCATGCTGGTTTTGTATTCTGATGATGCTCCACCGTATTCAGCCCCAGCAGATGTCTACCGCACATCCCGCGCAATGGCAACTTATCTCGGTGGACGTGTAAATTTAAATTACAATATGACCTGGTCTTTTACCATTGATTCAGGTTTCCTTTATCTAGTTAGGCTTCACTTCTGTGAAATTGATCAAGATATAACAAAGATCAATCAGGAAGTTTTTACCGTATTTTTAAATAATCAAACAGCTGAAGAAGAAGCCGATGTAATGGGTTGGGGGGGTGGAGAGCCCGGAGTTGCTGTACGCAGAGATTATGTAGTGATGGTTCCCCATGTTAATGAGGGAAAGCAGGATTTGTGGCTTGATCTGCACCCATACAAGGAAGCTAAACCTATGTACTATAATGCTTTCTTGAATGGTGTGGAGATCTTTAAACTCAGCAATTTTGGTGATAAGAGTCTTGCAGGGCCCAACCCTCCCAAAAGCTTCTTTTCAGATGCAAAGGCTCCCCATGTTGCTCATTTTAATAAAAGTTCGACGAAACTCAAATTCATCCTCATTGGATGTGGACTTCTTGCAGTGGCACTACCAATTCTCCTTTGCTTACTCCTATTCAGGTTAAAGGTGATTAGGCTTAGAAGGGTCGTGTCATGGTGCGGTCTCACTGTCCACACACCTAGTCGAATTGAAAAGGCAAAAAAATCGTCACTCTGCACTCAATTTTCGATGCGAGAGATAAAATTGGCGACAAATGATTTCCATGAGGCTTTATATATAAGCACTGGTGGATTTGGCAGTGTTTACAAGGGTAGCTTCATAGGTGGCACAACTTACGTGGCCATTAAACGTGCCAATCCAATGTCCGAGCAAGGTGTTTCAGAATTCGAGACAGAGATCCTTTTGCTCTCACAACTTAAGCATCATAACCTGGTGTCACTTTTGGGTTATTGCAATGAGGATGGGGAGATGATATTGGTCTATGACTTCATGGCCAATGGAAGTCTACATGATTATCTTCATTTGAGGCGGAGAGATCAACCTCCTTTGTCTTGGATTCAACTTCTTGAGATTTGCATTGGAGTTGCAAGGGGCTTGCACTACCTTCACACTGGCACAAAGCACAGGATCATCCACCGCGACATCAAGACAACCAACATACTCTTAGATCACAACTGGGTGCCCAAAATTTCAGATTTTGGGTTGTCAAAGGCAGGTTACCCTTCCTTAGTCACCACCAACGTGAAGGGTAGCATTGGTTACCTAGATCCCGAGTGCTATGAAAGTCTCAAGTTGTCTGAGAAATATGATATATACTCACTTGGGGTGGTGTTATTGGAGGTTCTGACTGCAAGGCCTGCTGTAAGTGTAGGTGAAGATGATGAGCATGTTAACTTGGCCGAATGGACTATGTCGTGCCTTGAGAATGGCAATGTGGAGCAAATAGTTGACCCCAACTTGAAAGAAAACATAATTAAGGAGTGCTTTGAGTTATATTTAGCAGTTGCAATGAAATGTTTGGTTGAAAGAGGGGCGGAGAGGCCATCCATTGGTGAAGTGCTAGAGAACCTTGTTCTGGCAATGCATCTTCAGAAAAATGAAGGCAATGTCCCAAATGGAAATGAACGCAGAAGTGATAATGTTGTTCTGCAGGGTAATTCAGATTTGACACCTGGGGTTGAGTTCTCTGAAATCATGATGCCTATTGGTCGGTGA 2535 0.4264 MQRIMNAFICSGYIFILYLLNLQLVAVADNGSYVPTENIVLNCGSSTSEFVQYDGRNWSGDIVSPYVPSNADTKSLVVRATNTLQSIPQVPYMTARIFHSQFTYTFNVTPGPKFIRLHFYPASYTDLNISNAFLSVSAANFTLLHNFSASLNADYYNLAYFMKEFIVHVSGSVLQLTFSPSYNASRAFAFVNGIEIVSMPLNLYMRGDDGDPLPLVGHDNKVVNIYNDSAMETLYRVNVGGEQIPSKYDTGMFRTWDTDEVYIFGADFGIQPCNMSMLVLYSDDAPPYSAPADVYRTSRAMATYLGGRVNLNYNMTWSFTIDSGFLYLVRLHFCEIDQDITKINQEVFTVFLNNQTAEEEADVMGWGGGEPGVAVRRDYVVMVPHVNEGKQDLWLDLHPYKEAKPMYYNAFLNGVEIFKLSNFGDKSLAGPNPPKSFFSDAKAPHVAHFNKSSTKLKFILIGCGLLAVALPILLCLLLFRLKVIRLRRVVSWCGLTVHTPSRIEKAKKSSLCTQFSMREIKLATNDFHEALYISTGGFGSVYKGSFIGGTTYVAIKRANPMSEQGVSEFETEILLLSQLKHHNLVSLLGYCNEDGEMILVYDFMANGSLHDYLHLRRRDQPPLSWIQLLEICIGVARGLHYLHTGTKHRIIHRDIKTTNILLDHNWVPKISDFGLSKAGYPSLVTTNVKGSIGYLDPECYESLKLSEKYDIYSLGVVLLEVLTARPAVSVGEDDEHVNLAEWTMSCLENGNVEQIVDPNLKENIIKECFELYLAVAMKCLVERGAERPSIGEVLENLVLAMHLQKNEGNVPNGNERRSDNVVLQGNSDLTPGVEFSEIMMPIGR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g03027 844 SUPERFAMILY Protein kinase-like (PK-like) 512 800 IPR011009 -
Phco8g03027 844 FunFam receptor-like protein kinase FERONIA 494 603 - -
Phco8g03027 844 Gene3D Phosphorylase Kinase; domain 1 493 603 - -
Phco8g03027 844 FunFam FERONIA receptor-like kinase 229 421 - -
Phco8g03027 844 ProSiteProfiles Protein kinase domain profile. 527 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g03027 844 FunFam Os07g0541700 protein 604 685 - -
Phco8g03027 844 Pfam Protein kinase domain 533 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g03027 844 Gene3D - 38 200 - -
Phco8g03027 844 Gene3D - 229 421 - -
Phco8g03027 844 PANTHER OS03G0124300 PROTEIN-RELATED 14 482 IPR046957 GO:0004672
Phco8g03027 844 SMART serkin_6 527 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g03027 844 Gene3D Transferase(Phosphotransferase) domain 1 604 820 - -
Phco8g03027 844 Pfam Malectin-like domain 41 419 IPR024788 -
Phco8g03027 844 FunFam FERONIA receptor-like kinase 38 200 - -
Phco8g03027 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Phco8g03027 844 CDD STKc_IRAK 533 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g03027 Phco-Chr8 44528056 44530590 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco8g03027 Malectin_like 1e-35 CL0202