Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02989 ATGGGAAAAAGAGTTGTGTCCTTTGTTCTTCCCTACAGAGCCTTGTTTTTCTCCTCCACTCCTGAAAGCCCCACCCTTTACTCCTTCCTCCAGCCCTCAATCTTTGCCCTCACCAAAAACAAGCAGCAACCCATTTCAGAAGCCTCCCCAAAGGCTCCAACTTGCCTCTCAACTTCCCAGCTCTCTACTCTCCAAACAACCCTCCACAAGTCCCTCCTAAGCAGCAACACTGATGAGGCATGGAAGTCCTTCAAGGCCCTCACCACCCACCAAGCTTTTCCTCCCAAACCCCTCACCAACTCCCTCCTCTCCCACCTCTCCTCCCTTGGTGACACCCTCAACCTCAAGAGGGCCTTTGCCTCTGCTCTCTTTCTCATGGAGAAGAACCCCTTGCTGCTCCAACATGACACCCTCCACCACATGCTCCTCTCCATGAAGGGTGCCAACACTGCAGCCCCTGCCTTTGCCCTTGTCAGGTCCATGCTCAGGTTCAGGTTCTTTGTTCCCTTTCATGTTTGGGGGCCTGTGCTTGTTGAGATCAGTAGGGACTGTGGTAACCTTGCTGCTTTCTTGAGGCTCTTTGAGGAGAATTGTAGGGTAGCTCTTGAGGAGAGAGTTGAGTTCATGAAGCCTGATGTTGGTGCTTGCAATGCATCATTGGAAGGTTGCTGCTGTGAGCTTGAGTCTGTAAGTGATGCTGAGAGGGTTGTGGGGACAATGTCAAATTTAGGGGTTAGGCCTGATGAGTCCAGTTTTGGGTTTCTGGGGTATTTGTATGCACTCAAAGGGTTGGAAGAGAAGATTAGGGAGTTAGAAGTTTTGATGGGTGGGTTTGGCTGTTTAAACAAGAAGGGTTTTTATTGTAATTTGATTAGGGGTTACGTTAAGTCAGGCAATTTGGCTTCTGTGGAGGCAACTATTGTTAGATTTCTGAATGATGAAGGTGGGAAGGATTGGGGTTTTGATGTTGAAACTTTCTGTGAAGTGATTAAGGTTTATTTTCAGAAGGGAAATGTCAAGGGGTTGGCCAATTTGATTGTTGATGCTCACAAGATAGAGGGTTCAAATATTGTGGTTGATAGGTCTATAGGGTATGGTATTGTTAATGCGTGTGTTAGTATTGGACTATCTGATAAAGCACATAGTATTCTTGATGAGATGAATGTTCAGGGGGCCTCTGTGGGTCTTGGGGTCTATATACCTATCTTGAAGGCTTACTGCAAAGAAAATAGAACTGCTGAGGCTACTCAATTGGTGATGGAGATTAGTAATTCAGGTCTTCAGTTGGATGTAGAAACCTATGATGCTTTGATAGAAGCATCCATGTGCAGCCAAGATTTTCAGTCAGCGTTTTCACTGTTTAGGGACATGAGAGAAGCAAGGATTCCTGACTTGAAAGGGAGTTACTTAACTATAATGACAGGTTTGATGGAGAAGCATCGGCCTGAGTTGATGGCAGCTTTCTTGGATGAGGTGGTTGAGGATCCTAGGATTGATGTAGGTACTCATGATTGGAATTCTATCATCCATGCTTTCTGTAAAGCTGGGAGACTAGAAGATGCGAGAAGGACTTTTAGAAGGATGATTTTCCTGCAGTTTGAGCCAAATGATCAGACGTACTTGTCTATGATTAATGGATATGTCTTGGCTGAGAAATATTTTCTCGTGCTGATGTTGTGGAACGAGGTTAAGAGGAAGCTATCCATGGATGGGCAGAAGGGGATCAAGTTTGACCAAAATTTGGTTGATGCATTCCTTTATGCTATGGTCAAGGGTGGCTTCTTTGATGCTGTAATGCAAGTTGTGGAGAAAGCTAATGAGATGAAAATTTTTGTTGATAAGTGGAGATACAAGCAAGCGTTCATGCAGACCCATAAAAAGCTCAGGGTGGCAAAGTTAAGGAAAAAAAAATTTAGAAAAATGGAAGCAATTATCGCTTTCAAGAACTGGGCTGGCTTAAATGCCTGA 1968 0.4477 MGKRVVSFVLPYRALFFSSTPESPTLYSFLQPSIFALTKNKQQPISEASPKAPTCLSTSQLSTLQTTLHKSLLSSNTDEAWKSFKALTTHQAFPPKPLTNSLLSHLSSLGDTLNLKRAFASALFLMEKNPLLLQHDTLHHMLLSMKGANTAAPAFALVRSMLRFRFFVPFHVWGPVLVEISRDCGNLAAFLRLFEENCRVALEERVEFMKPDVGACNASLEGCCCELESVSDAERVVGTMSNLGVRPDESSFGFLGYLYALKGLEEKIRELEVLMGGFGCLNKKGFYCNLIRGYVKSGNLASVEATIVRFLNDEGGKDWGFDVETFCEVIKVYFQKGNVKGLANLIVDAHKIEGSNIVVDRSIGYGIVNACVSIGLSDKAHSILDEMNVQGASVGLGVYIPILKAYCKENRTAEATQLVMEISNSGLQLDVETYDALIEASMCSQDFQSAFSLFRDMREARIPDLKGSYLTIMTGLMEKHRPELMAAFLDEVVEDPRIDVGTHDWNSIIHAFCKAGRLEDARRTFRRMIFLQFEPNDQTYLSMINGYVLAEKYFLVLMLWNEVKRKLSMDGQKGIKFDQNLVDAFLYAMVKGGFFDAVMQVVEKANEMKIFVDKWRYKQAFMQTHKKLRVAKLRKKKFRKMEAIIAFKNWAGLNA 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02989 655 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 212 247 IPR002885 -
Phco8g02989 655 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 501 535 IPR002885 -
Phco8g02989 655 Gene3D Tetratricopeptide repeat domain 175 305 IPR011990 GO:0005515
Phco8g02989 655 Gene3D Tetratricopeptide repeat domain 464 626 IPR011990 GO:0005515
Phco8g02989 655 Pfam Pentatricopeptide repeat domain 418 462 IPR002885 -
Phco8g02989 655 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 430 464 IPR002885 -
Phco8g02989 655 PANTHER BNAC05G43320D PROTEIN 18 654 - -
Phco8g02989 655 NCBIfam pentatricopeptide repeat 505 536 IPR002885 -
Phco8g02989 655 Pfam PPR repeat family 505 547 IPR002885 -
Phco8g02989 655 Gene3D Tetratricopeptide repeat domain 349 463 IPR011990 GO:0005515
Phco8g02989 655 Pfam PPR repeat 368 388 IPR002885 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02989 8 43889659 43891626 Phco8g02989 8 43889659 43891626 ECH