Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02918 ATGTATTCAGGTCAGGAAATATTGTCATTGTCTGATATTTTGTTTCAGAATAACTTACAGTTTCTGCCTGTTCATTGCATTCTGTTCACAAAACTTATGCAATCTCTCAAGTCACAACCTGCTTTTTCATTTTCTCTTTTCAATCAATTCTCCTCTCACTGTCTCACATCCTTCCTCTCTTTCTCAACCAAATCTCATTGCCTAGGCTTCAACCAAATCACTTCCATAATTGATTACCTAAATTCCAGCTTCCAATTCTCCACAACTCAATCCCTTTATATTTCTAAATGTGTTTCAAGGGGCAGATTCCCTCACAACTCCTTATCAGTGCTCACTTTTTTAAAAAACACAGGCTTTTCCCAAACCCAGATTCTCTCTGTGATTCGTCAAAGACCCCAGATACTGTTTACAGATGTTGACAAAATCTTAAGACCCAAAATTCAGTTCTTTCAGCTGTCTGGATTCCAGGGTTGCGAGTTATGTAGTTTCATTTCCAAGAATCCCTCCATTTTGACTCATAGCTTGAAGAAAACCTTGGTCCCCTCAGTTGAAGCTATTAGGAAAATTGTGTGCGATCAGAAAGATTTTCTTCTTGTGTTGCGCAGATGTGGCTGGATACTCTCAAAGTACAAAAGGTTTATGGACAATGTCGTCTTCTTGGAGAGGTGTGGCATTCTTGGGGCTCATCTTGCATTGCTACTCAGACTTCATCCAAGGCTTTTCCTTGCACGCCAGTCTACTATTGAAAACAATGTTTCTCGAGCTGTAGACTTGGGTTTCCGTGAAAATTCAAGAATGCTTGTCCATGCAATTCATACATTAAGTTGTTTGAGCGATAAAACATTTGAGAGAAAGCTGAAACTAATTAATTCTTTTGGGTTTTCCAAGGATGAGGGCTTGCAAATGTTCAAGACAACCCCGACTTTGTTCAGAACATCAGAGAAGAAGTTGAAAGTTGGAATGGAATTCTTCTTGCATACAGTAATGCTGCCCAAGTCAGTCCTTGTTCATCTGCCTAAGATTTTAATGTACAGCATGGAGGATCGCGTGCTTCCTCGATATAAAGTCTTCCAGTTGTTGAAATCAAAAAATCTTTGCAAGAAAGTCCCCAGTTATATTCATGTGTTGTGCTTGTCTGAGGAGATGTTCTTGGACAAATATATATCAAAGTTCAGAGAAAATGCAGAGGAGTTATTAGTAGCATACAAGGGTCACTATCTGGAGGCATAA 1230 0.3911 MYSGQEILSLSDILFQNNLQFLPVHCILFTKLMQSLKSQPAFSFSLFNQFSSHCLTSFLSFSTKSHCLGFNQITSIIDYLNSSFQFSTTQSLYISKCVSRGRFPHNSLSVLTFLKNTGFSQTQILSVIRQRPQILFTDVDKILRPKIQFFQLSGFQGCELCSFISKNPSILTHSLKKTLVPSVEAIRKIVCDQKDFLLVLRRCGWILSKYKRFMDNVVFLERCGILGAHLALLLRLHPRLFLARQSTIENNVSRAVDLGFRENSRMLVHAIHTLSCLSDKTFERKLKLINSFGFSKDEGLQMFKTTPTLFRTSEKKLKVGMEFFLHTVMLPKSVLVHLPKILMYSMEDRVLPRYKVFQLLKSKNLCKKVPSYIHVLCLSEEMFLDKYISKFRENAEELLVAYKGHYLEA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02918 409 PANTHER CGI-12 PROTEIN-RELATED 74 391 IPR003690 GO:0003690|GO:0006355
Phco8g02918 409 Pfam mTERF 111 263 IPR003690 GO:0003690|GO:0006355
Phco8g02918 409 Pfam mTERF 276 384 IPR003690 GO:0003690|GO:0006355
Phco8g02918 409 SMART mt_12 231 261 IPR003690 GO:0003690|GO:0006355
Phco8g02918 409 SMART mt_12 197 226 IPR003690 GO:0003690|GO:0006355
Phco8g02918 409 SMART mt_12 161 192 IPR003690 GO:0003690|GO:0006355
Phco8g02918 409 SMART mt_12 300 331 IPR003690 GO:0003690|GO:0006355
Phco8g02918 409 SMART mt_12 265 295 IPR003690 GO:0003690|GO:0006355
Phco8g02918 409 SMART mt_12 332 363 IPR003690 GO:0003690|GO:0006355
Phco8g02918 409 SMART mt_12 125 156 IPR003690 GO:0003690|GO:0006355
Phco8g02918 409 Gene3D Transcription termination factor 3, mitochondrial 189 396 IPR038538 -
Phco8g02918 409 FunFam Mitochondrial transcription termination factor-like 175 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02918 Phco-Chr8 43004837 43007514 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phco8g02918 mTERF 1.1e-19 No_clan