Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02870 ATGAAATTTCAAGGGAAAAGCTCCTTGCTATTGCTTCTCCTGCTTTCTATCACCCTTTATCTTGGATCTTCTCAAACTTCTGTTTCTAACTGTGTCCTTGATATTCCATCTTCTTCATCCTTGGGTAGTTCGAATTGTGAATTGTACAATTGGGGAGGGTTTACCAATGGCTGTTGTGGACCATATTTTGGGGATTACCTTTATGCCTTGGGGGTGAGGACAAACCAAACTGGAAAAGTATTTTTGAATCCCTCAGAGCAAAAAAACTGTATAGCATCAATGGAAGCTTTTGAAAAAAAATTTACTTGTTATGGAATAGAGAAGCTAACAAGTGGAACTGGTGGTTGTTCTGATTACACCATCACAGATGTTATTAATCAGCTTGGAGACAACCTTATGAGATTGGAGGAAGAATGCATGCCTTTAAGCACAAATGGTAGGCCAAATGAAACTTGCACTAAATGTTTGAAAGCATGGGAGGATATCAGTGCAAAACCGGACAGTACAAGAGGATCAGAGTCAGCAAATATCAGTTCTTATCTTTGTAGGTTTGCTGTGCTTGTCTCACTAACAAGCACAAGAATTTTTTATAAGGAATCGATTCTAGAAGTTTATAAATGCCTAGGGGAACACGCCCTTTCTGCAGGATTAGCTTCAGCTAATCAAGAAGTGAAGGCTAGGGGCAATGCTAATATCAACTCAGGTCTCTGGATTGCATTTGGGATAACAGGAGTTATAGTATTGGTGTTTCTTGCCGCAATAGCATTATTTGTCAGAAGAAATAGAAGTGTTCCATCCGTACAAAATGAGTCTGATTCACCTTCACTGAAGATAACTTTGAAGGATGTTTATGTAGCAACAAGCAATCTCAGTGCTTCAAATTTCATAGGCCAAGGCATAGCCGGAAAAGTGTACAAAGGTGTACTCTCCAACAATCAGTCTGTTGCAGTGAAGCATATCACCAATGAATGTTACATGGAGACATTTGTTAGAGAACTGAGAAGCCTTTCCCATGTTAGACATCACAACCTAGTAGCTTTGCTGGGATACTGTGAAAGTGAAGGTGAATGCTTCCTTGTGTATGAGCTCTGCCACAATGGAAACCTCTCAGAATGGCTATTTGGCAATGGTAAAGTTCTTTCATGGATTCAAAGACTAGAGATTGCCATTGACAGTGCAAGAGGCCTTCAGTTTCTCCATACCTACCCAAATGGCTGCATCGTTCACCGTGATGTAAAGCCATCAAACATTCTTATTGATGCTAAGTTCCAAGCAAAGCTTTCAGACTTTGGGTTGTCCAGGGTTATGGACTTGGGTCAATCCTATGTGAGCTCTGAAGTAAGAGGAACATTTGGTTATATTGATCCTGAATATAGGACAAATCACCAAGTTAAGGCCTCAGGAGATGTCTACAGCTTTGGAATAGTGTTATTGCAACTTCTATCAGGTCAAAGGATCATTAACATTGATTTCAACAGACCAATGTCTCTGGGTAAAATGGCCAGAGATGTTGCTAGTGGTGGTGATATTTCAGAATTTGCTGATCCTAAACTCAAAGGGGAGTACTCAGTTGAAGCATTTGACATCTTACTAATGCTAGCTTTGTCTTGCGTAGGGCTCAAGCGGCAAAGACCCTCTATAGATCAAGTGTTATATAGCCTAGAAAAGACACTAGATATTTCATTATAA 1689 0.3996 MKFQGKSSLLLLLLLSITLYLGSSQTSVSNCVLDIPSSSSLGSSNCELYNWGGFTNGCCGPYFGDYLYALGVRTNQTGKVFLNPSEQKNCIASMEAFEKKFTCYGIEKLTSGTGGCSDYTITDVINQLGDNLMRLEEECMPLSTNGRPNETCTKCLKAWEDISAKPDSTRGSESANISSYLCRFAVLVSLTSTRIFYKESILEVYKCLGEHALSAGLASANQEVKARGNANINSGLWIAFGITGVIVLVFLAAIALFVRRNRSVPSVQNESDSPSLKITLKDVYVATSNLSASNFIGQGIAGKVYKGVLSNNQSVAVKHITNECYMETFVRELRSLSHVRHHNLVALLGYCESEGECFLVYELCHNGNLSEWLFGNGKVLSWIQRLEIAIDSARGLQFLHTYPNGCIVHRDVKPSNILIDAKFQAKLSDFGLSRVMDLGQSYVSSEVRGTFGYIDPEYRTNHQVKASGDVYSFGIVLLQLLSGQRIINIDFNRPMSLGKMARDVASGGDISEFADPKLKGEYSVEAFDILLMLALSCVGLKRQRPSIDQVLYSLEKTLDISL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02870 562 FunFam Serine/threonine kinase protein 256 363 - -
Phco8g02870 562 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Phco8g02870 562 SMART serkin_6 290 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g02870 562 Gene3D Phosphorylase Kinase; domain 1 253 363 - -
Phco8g02870 562 FunFam probable receptor-like protein kinase At5g59700 364 562 - -
Phco8g02870 562 Pfam SPARK 27 169 IPR043891 -
Phco8g02870 562 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 206 556 - -
Phco8g02870 562 ProSiteProfiles Protein kinase domain profile. 290 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g02870 562 Gene3D Transferase(Phosphotransferase) domain 1 364 561 - -
Phco8g02870 562 SUPERFAMILY Protein kinase-like (PK-like) 271 554 IPR011009 -
Phco8g02870 562 Pfam Protein kinase domain 294 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02870 Phco-Chr8 42205820 42208926 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Phco8g02870 Pkinase 3.4e-41 CL0016