Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02811 ATGTTCCTCAAAGTGTTTGAATATCAAATAATGAGTAGAGGTGGAAAAAATATGACGAAATTGGAAGCCAGGGAATATTTAAAAAAAGTGCAAAAGAAATTTGAAGACAAGAAGGAAAAGTTCGAGGAGTTTTTGAAGATCATAACCGATTATAGAGTTCATAGAATGACTGTTGGGAGTGTGGTAGAAAAAGTGGAGGAAATTCTTAAAGACCACCATGATCTCATTTCTGGAATTAACGACTTTTTGCCAAAGGGATATGAAATCCTTCTTCCACCTAAGGGTACAGTCCAGTTGGAAGATGCTATCAAATATGTGCAGAAGATTAAGGATCGATTTGGAGAAACAGATGTTATCTACAAGGCATTTGTGAAGATATTAACTAATAGGAACAAAGATGGCGTCTCAGTTGGTGAAGTATACCATGAGGCAAGTGTTGTCTACGTATTTGTTGAAAAACTTTTTTATGGTCACCATGATCTTGTTCGTGATTTCTCTTTGTTTTTGCCATCTAATGATGCTTAA 525 0.3543 MFLKVFEYQIMSRGGKNMTKLEAREYLKKVQKKFEDKKEKFEEFLKIITDYRVHRMTVGSVVEKVEEILKDHHDLISGINDFLPKGYEILLPPKGTVQLEDAIKYVQKIKDRFGETDVIYKAFVKILTNRNKDGVSVGEVYHEASVVYVFVEKLFYGHHDLVRDFSLFLPSNDA 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02811 174 ProSiteProfiles PAH domain profile. 16 86 IPR003822 GO:0006355
Phco8g02811 174 SUPERFAMILY PAH2 domain 93 171 IPR036600 GO:0006355
Phco8g02811 174 Gene3D Paired amphipathic helix 22 84 IPR036600 GO:0006355
Phco8g02811 174 PANTHER SIN3B-RELATED 21 174 IPR039774 GO:0003714
Phco8g02811 174 Gene3D Paired amphipathic helix 95 173 IPR036600 GO:0006355
Phco8g02811 174 Pfam Paired amphipathic helix repeat 119 169 IPR003822 GO:0006355
Phco8g02811 174 Pfam Paired amphipathic helix repeat 39 83 IPR003822 GO:0006355
Phco8g02811 174 SUPERFAMILY PAH2 domain 17 85 IPR036600 GO:0006355
Phco8g02811 174 FunFam Paired amphipathic helix protein Sin3 22 84 - -
Phco8g02811 174 ProSiteProfiles PAH domain profile. 95 172 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02811 Phco-Chr8 41362815 41364365 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco8g02811 PAH 1e-08 No_clan