Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02810 ATGTTGAGGCAGTGTCTTGAATATCAAATAATGAGTAGAGGTGAAGAAAATATGGCAAGATTGGAAGCCGTGGAATACTTAGACAAAGTGCAGAAGAAATTTGAAGACAAGGAAAAGTTCAAGGAGTTTTTGAAGATCATAACCAGTTATATACTTTATAGAAAGGATCTTGGGAGTGTGGTAGAAAAAGTGAAGGAATTTCTTAAAGACCACCATGATCTCCTTTCGGGATTTAACAATTTTTTGCCAGAGGGATATGAAATCCTTCTTCCACCTAAGGATACAGTCCAGTTGGAAGATGCTATCAAATATGTGCAGAAGATTAAGGATCGATTTGGAGACACAAATGGTATTTACAAGGCATTTGTAGAGATATTAACTAATTGGAAGAAAAATGGCATGTCAAATGGTGAAGTATACCATGAGGCAAGTGTTGTCTATGTATTTGTGTGA 453 0.3598 MLRQCLEYQIMSRGEENMARLEAVEYLDKVQKKFEDKEKFKEFLKIITSYILYRKDLGSVVEKVKEFLKDHHDLLSGFNNFLPEGYEILLPPKDTVQLEDAIKYVQKIKDRFGDTNGIYKAFVEILTNWKKNGMSNGEVYHEASVVYVFV 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02810 150 Gene3D Paired amphipathic helix 22 83 IPR036600 GO:0006355
Phco8g02810 150 ProSiteProfiles PAH domain profile. 14 85 IPR003822 GO:0006355
Phco8g02810 150 ProSiteProfiles PAH domain profile. 94 150 IPR003822 GO:0006355
Phco8g02810 150 PANTHER SIN3B-RELATED 22 145 IPR039774 GO:0003714
Phco8g02810 150 Pfam Paired amphipathic helix repeat 38 82 IPR003822 GO:0006355
Phco8g02810 150 SUPERFAMILY PAH2 domain 17 86 IPR036600 GO:0006355
Phco8g02810 150 Gene3D Paired amphipathic helix 100 147 IPR036600 GO:0006355
Phco8g02810 150 SUPERFAMILY PAH2 domain 92 144 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02810 Phco-Chr8 41350386 41351333 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco8g02810 PAH 1.2e-10 No_clan