Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02756 ATGAGTACAAAACAAACCGAAATGGACGATGCTTCTTCTTCTTCATCACCTAAGCAAGATAAAAACATAAAAAAGCATCCTAAAGACAAGGATTCTGCTACATCACCAAAGTCTTCTGATTCAGATTCAGATTCTCCAGATTCAGAATCTCCGGATTCAGATTCTCCGGATTTAGATTCTCCAGATTCAGAATCTCCGGATTCAGATTCTCCGGAGAGTCCTCCGTCTGATTCACCACCGTCACCGCCCCCTCCTTCCAAACCTCCATCCACCTCGCCATCGCCGTCGCCGACATCTAAAAGTCCATCATCATCACGGCCATCAACTAAAAATTTAAGTCCATCACCGTCATCTAAATATTCAAGTCCATCACCACCATCGCCGTCATCTAAAGATTCAAGTGCACCACCGCAACTTCCACTGTTACCATCGCCTCCACCACCCTCGCCATTGCCATCTTCACTACCACCACCTTCGCCCGCACCTTCCCCGCCACGACCTTCGCCCTCATATTCCCCGCCAACACCTTCATCCCCACGTTCCCCACCACCCCCTTCCTCGCCACCACATCGGTCGACGCAGTCATATCCACTACTATGGCAAAATGACAATTCTTCCCCATCACCACGTAAAAATTCGCCACCACCATCACCACAGTTCTATGCTCCACCTCCCCTTGATAAACCTTCTACGAATAGCTTGCGTGATGCAGCCTCCAATGACTCAACAACGGGAAGCTCTTGGAACTCACAGGCAACAGGATCAAGCCCCCGGGTCAAGCGTGGCGTTAATTCCCATGCAAACTCAACGGTTTCTTCTCCCGCCCCCGGTGATAATTCAGAAAAATATGTTACCTATACAGTCGCCGGACTTTTAGCTTTTGCCTTGGTTGCTGTAGCTGTAGCCGTAGCCTTTGCTTTGGTGTTTAAGAGGAAGAAATCAAGAGATGATGCTAATGGTGCACCCTACATGCCACCCCTTGATATTCAAGTCAAATCAGGTGCTAATGGGCATTACTACGAACAGCAGCCTTCCCTTGCAAACACCATCGGAAATGGGAATGCGAACGTGAAGCATTTTGGATCTCCTTTAAACTCACCCCAGCTCAAAAGTGCTCCGATAGTTTTCACCTATGAAATGGTTATGGAAATAACAAACGCATTTTCTAGTCAAAATGTTATAGGGGAAGGAGGATTTGGATGTGTTTACAAAGGTTTGCTGCCAGATGGAAAAGGAGTTGCAGTAAAGCAGCTTAGGGCTGGCAGTGGGCAGGGAGAAAGGGAATTCAAGGCTGAAGTGGAGATCATTAGCCGTGTACATCATCGATATTTGGTGTCATTAGTTGGTTATTGCGTATCTGAACAGCAAAGAATTCTTATCTATGAGTATGTTCCTAATGGAACACTCCATCATCACTTGCATGGAAGGGCAATGCCAGTGTTGGATTGGTGCAAAAGGCTAAAGATTGCAATAGGCGCTGCAAAGGGCCTGGCATATCTTCACGAGGACTGCAGCCAAAAAATAATTCACCGAGATATTAAGTCAGCAAACATACTCTTGGATGATGCTTTTGAGGCAAAGGTTGCTGACTTTGGACTTGCTAGGCTATCTGATGCTGCCAATACCCATGTATCAACTAGGGTTATGGGGACCTTTGGGTACATGGCTCCAGAATATGCAACAAGTGGAAAATTAACGGACAGATCAGATGTTTACTCATTTGGGGTTGTCCTCCTTGAGCTTGTTACGGGAAGAAAACCCGTTGATCAAACTCAGCCAATTGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCATTCGTGCAATGGAGACACGTAATTTTAGTGAACTGGTAGATCCAAGACTTGAAAAACAGTTTGTGGAGAGTGAAATGTCCAGAATGGTTGAGGCAGCTGCAGCTTGTGTTCGCCACTCAGCTCCTAAACGGCCTCGTATGGTTCAGGTGGTAAGAGCCTTGGATACTGTTGATGAAAGTTCTGATCTATCTAACGGGGTGAAATATGGTCAGAGCACAAATTATGATTCTGGCCAATATGATAAAGAAATAATGCTATTCAAAAGGTTGGCAAATGGCACCTTTGTTGATTCTGATTTTGATAGTAGAGAATACAGTCTTTCAAGACAGACCTCGAGAGGATCCCAACAAGAATTGATTCGGTATAGTTCTAGTGGCGAGTCAGAACCTAGAGCATAG 2220 0.4586 MSTKQTEMDDASSSSSPKQDKNIKKHPKDKDSATSPKSSDSDSDSPDSESPDSDSPDLDSPDSESPDSDSPESPPSDSPPSPPPPSKPPSTSPSPSPTSKSPSSSRPSTKNLSPSPSSKYSSPSPPSPSSKDSSAPPQLPLLPSPPPPSPLPSSLPPPSPAPSPPRPSPSYSPPTPSSPRSPPPPSSPPHRSTQSYPLLWQNDNSSPSPRKNSPPPSPQFYAPPPLDKPSTNSLRDAASNDSTTGSSWNSQATGSSPRVKRGVNSHANSTVSSPAPGDNSEKYVTYTVAGLLAFALVAVAVAVAFALVFKRKKSRDDANGAPYMPPLDIQVKSGANGHYYEQQPSLANTIGNGNANVKHFGSPLNSPQLKSAPIVFTYEMVMEITNAFSSQNVIGEGGFGCVYKGLLPDGKGVAVKQLRAGSGQGEREFKAEVEIISRVHHRYLVSLVGYCVSEQQRILIYEYVPNGTLHHHLHGRAMPVLDWCKRLKIAIGAAKGLAYLHEDCSQKIIHRDIKSANILLDDAFEAKVADFGLARLSDAANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVYSFGVVLLELVTGRKPVDQTQPIGDESLVEWARPLLIRAMETRNFSELVDPRLEKQFVESEMSRMVEAAAACVRHSAPKRPRMVQVVRALDTVDESSDLSNGVKYGQSTNYDSGQYDKEIMLFKRLANGTFVDSDFDSREYSLSRQTSRGSQQELIRYSSSGESEPRA 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02756 739 Gene3D Phosphorylase Kinase; domain 1 354 463 - -
Phco8g02756 739 MobiDBLite consensus disorder prediction 713 739 - -
Phco8g02756 739 MobiDBLite consensus disorder prediction 72 96 - -
Phco8g02756 739 Gene3D Transferase(Phosphotransferase) domain 1 464 683 - -
Phco8g02756 739 ProSiteProfiles Protein kinase domain profile. 388 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g02756 739 MobiDBLite consensus disorder prediction 1 18 - -
Phco8g02756 739 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 296 697 IPR047117 -
Phco8g02756 739 MobiDBLite consensus disorder prediction 19 37 - -
Phco8g02756 739 SUPERFAMILY Protein kinase-like (PK-like) 363 661 IPR011009 -
Phco8g02756 739 MobiDBLite consensus disorder prediction 713 731 - -
Phco8g02756 739 MobiDBLite consensus disorder prediction 192 208 - -
Phco8g02756 739 MobiDBLite consensus disorder prediction 45 66 - -
Phco8g02756 739 MobiDBLite consensus disorder prediction 1 280 - -
Phco8g02756 739 FunFam Proline-rich receptor-like protein kinase PERK8 362 463 - -
Phco8g02756 739 MobiDBLite consensus disorder prediction 232 280 - -
Phco8g02756 739 Pfam Protein tyrosine and serine/threonine kinase 391 661 IPR001245 GO:0004672|GO:0006468
Phco8g02756 739 SMART serkin_6 388 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g02756 739 ProSitePatterns Protein kinases ATP-binding region signature. 394 416 IPR017441 GO:0005524
Phco8g02756 739 MobiDBLite consensus disorder prediction 97 118 - -
Phco8g02756 739 FunFam proline-rich receptor-like protein kinase PERK8 464 676 - -
Phco8g02756 739 MobiDBLite consensus disorder prediction 209 225 - -
Phco8g02756 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Phco8g02756 739 MobiDBLite consensus disorder prediction 119 191 - -
Phco8g02756 739 CDD STKc_IRAK 394 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02756 Phco-Chr8 40634209 40639703 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Phco8g02756 PK_Tyr_Ser-Thr 8.6e-49 CL0016