Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02691 ATGCAGGATCATAAGCTCGAAAGGGAAATGCGAGAGGTTGGAGAAGGAAACGATAAGTTGAAACTTTCATTGGTAAGGCTTGTAAAGGATTCAACTAGTGATGAAGAAAGTGAACTTGTTTCCCTTTCTCTTGGAATTTCATCTACAGATAAACATGAGAAGAATAATAGAACTGAAAAGATCAGAGAAAATGAGGATTTGAAGGAAGGACTTTCACTTGGGTTAGATATAAGATTTGACCCTTCAGCTATAAAAAATCACAGCACTGAAAGTAGGTGTGATGGGGAAAGGAAGGAAGAGGAACTCAGAGTGATATGGCCACCCAGTAAAGTTCTCAAGACAATGAGAACTTGGGATAAAAGTGAAGCTTCTCAACATGTTGAAGTCAAGAAGGCTAGGGTTTGTATCAGAGCTAGATGTGATACCCTCACGATGAATGATGGTTGCCAATGGAGAAAATATGGACAAAAAATAGCAAAAGGGAATCCGTGCCCCCGAGCATACTATCGATGCACTGTCTCTCCATCCTGTCCTGTGAAAAAACAAGTTCAAAGATGTGCTGAAGACATGTCAATCTTGATTACCACCTACGAAGGAACTCACAACCACCCTCTTCCTACTTCAGCAACTACCATAGCCTACACAACTTCCGCTGCTGCTTCCATGCTTCAGTCTCCCTCTTTGACCACACAACTAGGACTAGCCAATTCAGATACTGTTCCTCTCATCAATTCTAGTGTTCCTTGTAACCTTAATGCTCTAAACTTCACATCAAGCTATCACCACCTTTCAAAGTCACCACACCTATACTTCCACACCTCATCTATTTCTACCTCTAATTCTCATCCCACAGTCACTCTTGACCTTACCACTCCTCAAACTTCACCTCACATTGGAAAATTCACCCCAAGCTTGTCTTTCATACCAAAATATTCATCAACCAATGTTGATTCTTCGTCGAGTACTTTCTCTCCTTTGCAATCTAGTACGCTGTACTCACCTTGTTATGGTGATTACTTTAACTATGGGGGATTGATAACCCCAAATAGAAACCATAATGGTTCCCTTATGAACACCGGAAAACAACCATTCCTGGGGCATCCTTGTCAATCTAATCACATTAGCAACCATGCCATATCTAAACAACCTCTACCTGATTCCATTGTAGCTGCAACCAAAGCAATCACTGCTACCCCAAAATTTCAATCTGCAATAGCAGCTGCCCTCACAGCATATGCTGGTAATGGGGTAAAAGAAAATCATGATGAGGCACAGAGTGCAGGTTTGGACTTAAATCTAGGTGGAGATATGGCATACACAACGAACACAGTTTACGCTAATTCTAATGCATCAAGGTACAAGAGAATGTCATTTTCTGCTCCTAGTGCTCCGAAAAGAGACTCGGTCATATTTCAACCATCACATGCATCTAAAAGCTCCTTTGGATCTTCGTCTAGTAAAAGTAACCTATTCTTAGACCAATAG 1485 0.4114 MQDHKLEREMREVGEGNDKLKLSLVRLVKDSTSDEESELVSLSLGISSTDKHEKNNRTEKIRENEDLKEGLSLGLDIRFDPSAIKNHSTESRCDGERKEEELRVIWPPSKVLKTMRTWDKSEASQHVEVKKARVCIRARCDTLTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVSPSCPVKKQVQRCAEDMSILITTYEGTHNHPLPTSATTIAYTTSAAASMLQSPSLTTQLGLANSDTVPLINSSVPCNLNALNFTSSYHHLSKSPHLYFHTSSISTSNSHPTVTLDLTTPQTSPHIGKFTPSLSFIPKYSSTNVDSSSSTFSPLQSSTLYSPCYGDYFNYGGLITPNRNHNGSLMNTGKQPFLGHPCQSNHISNHAISKQPLPDSIVAATKAITATPKFQSAIAAALTAYAGNGVKENHDEAQSAGLDLNLGGDMAYTTNTVYANSNASRYKRMSFSAPSAPKRDSVIFQPSHASKSSFGSSSSKSNLFLDQ 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02691 494 SMART WRKY_cls 145 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco8g02691 494 FunFam probable WRKY transcription factor 31 130 207 - -
Phco8g02691 494 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 5 422 IPR044810 GO:0003700
Phco8g02691 494 ProSiteProfiles WRKY domain profile. 140 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco8g02691 494 MobiDBLite consensus disorder prediction 463 494 - -
Phco8g02691 494 Pfam WRKY DNA -binding domain 146 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco8g02691 494 MobiDBLite consensus disorder prediction 472 494 - -
Phco8g02691 494 Gene3D WRKY domain 130 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco8g02691 494 SUPERFAMILY WRKY DNA-binding domain 139 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02691 Phco-Chr8 39588216 39590085 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco8g02691 WRKY 2.9e-24 CL0274