Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02675 ATGTCTACCAGAAGATCTCGTTCCAGACAATCGCCTGTTTCCACTGAGATCACTGATGCTCAGATCACTGATCTCGTTTCCAAGTTACAACAACTTATCCCAGAGCTTCGCGCAAGACGTTCCGACAAGGTTTCAGCTTCTAAGGTGTTGCAGGAGACTTGCAACTACATCAAAAGCTTGCACAGAGAGGTTGACGACCTAAGTGACCGGTTGTCACAACTTTTGGCCACCACAGACTCCAACAGTGCCCAAGCAGCCATTATTAGGAGCTTACTTATGTAA 282 0.4681 MSTRRSRSRQSPVSTEITDAQITDLVSKLQQLIPELRARRSDKVSASKVLQETCNYIKSLHREVDDLSDRLSQLLATTDSNSAQAAIIRSLLM 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02675 93 CDD bHLH_AtPRE_like 17 77 - -
Phco8g02675 93 FunFam Transcription factor ILI6 7 89 - -
Phco8g02675 93 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 60 IPR011598 GO:0046983
Phco8g02675 93 Coils Coil 57 77 - -
Phco8g02675 93 PANTHER TRANSCRIPTION FACTOR PRE 1 93 IPR044293 GO:0006355|GO:0040008|GO:0046983
Phco8g02675 93 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 21 82 IPR036638 GO:0046983
Phco8g02675 93 Gene3D - 20 89 IPR036638 GO:0046983
Phco8g02675 93 Pfam Helix-loop-helix DNA-binding domain 21 61 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02675 Phco-Chr8 39248363 39249182 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phco8g02675 HLH 8.6e-06 No_clan