Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02662 ATGAGACCGGGAAAGGAACTGGGTGGCAAGGGAAGCCGAAGCGGAAGCGGCGGAAGCGGCGGAAGCAGAAAAGATAGAGTGAGAGTGAGGCGAAGGAAGATGTCGAACTTGCAGTTTCAACTACACTCTCAACCATCAATCTTATCGTCTTTATCTTCATTATCCTCGTCATCTCTTAAGCTATTCGCAAACCACTCTTTCTCTCCAAAGTCTCTTCCTTTCAACCCTCCTAAACCCTTCTCCCTAAGATGCCGCCACTCTGACCTCTTCGACCAGAACACCTTATCCTCATCACAACGACCCACAAGGCCCACTGCTTCAGTTGGAGCTTTGCCGCCTAGGGTTTATGTTGGTTACTCCATTTACAAAGGGAAGGCTGCGCTTACTTTGACTCCTAGACCACCGGAATTCGTGCCGCTCGATTCAGGGGCATATAAAATATCTAAGGAAGGTTATGTGCTGCTTCAGTTTGCACCTGCTGTTGGTACACGCCAATATGATTGGAATAGGAAGCAGGTGTTTTCCTTATCAGTGGGGGAAATGGGAAGTGTAATAAGCCTTGGTACAAGGGAGTCCTTTGAATTTTTTCATGATCCTTTTAAGGGCAAAAGCGATGAAGGCAAAGTCAGGAAAATTTTGAAGCTGGAACCTCTTCCAGATGGTTCTGGGCACTTATTTAACCTAAGTGTTCAAAACAAGCTTGTAAACGTGGATGAAAACATCTACATCCCTATTACAAAAGCAGAGTTAGCAGTTTTGAGCTCAACTTTCAATTTTATCATGCCATACCTTCTTGGTTGGCATACCTTTGCAAACTCCATAAAGCCAGAAGATACTAGCGGAGGGAATAATGCCAACCCAAGATATGGAGGTGACTATGAATGGAACAGATAG 894 0.4508 MRPGKELGGKGSRSGSGGSGGSRKDRVRVRRRKMSNLQFQLHSQPSILSSLSSLSSSSLKLFANHSFSPKSLPFNPPKPFSLRCRHSDLFDQNTLSSSQRPTRPTASVGALPPRVYVGYSIYKGKAALTLTPRPPEFVPLDSGAYKISKEGYVLLQFAPAVGTRQYDWNRKQVFSLSVGEMGSVISLGTRESFEFFHDPFKGKSDEGKVRKILKLEPLPDGSGHLFNLSVQNKLVNVDENIYIPITKAELAVLSSTFNFIMPYLLGWHTFANSIKPEDTSGGNNANPRYGGDYEWNR 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02662 297 Gene3D Transcriptional Coactivator Pc4; Chain A 109 284 IPR009044 GO:0003677|GO:0006355
Phco8g02662 297 MobiDBLite consensus disorder prediction 276 297 - -
Phco8g02662 297 SUPERFAMILY ssDNA-binding transcriptional regulator domain 113 297 IPR009044 GO:0003677|GO:0006355
Phco8g02662 297 MobiDBLite consensus disorder prediction 1 32 - -
Phco8g02662 297 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 71 297 IPR013742 GO:0003697|GO:0006355|GO:0006952
Phco8g02662 297 FunFam Single-stranded DNA-binding protein WHY2, mitochondrial 106 281 - -
Phco8g02662 297 Pfam Whirly transcription factor 121 255 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02662 Phco-Chr8 38930709 38933696 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Phco8g02662 Whirly 1.4e-58 CL0609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02662 8 38930709 38933696 Phco8g02662 8 38930709 38933696 ECH