Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02428 ATGGCTGAATCTGATAACGAGTCAGGAGGTGGAAAGAATGAATCGTCAATTTGCAGAGAGCAAGACAGGCTCCTTCCCATAGCCAACGTGGGCAGGATCATGAAGAAGGTGTTGCCAGGAAACGCTAAGATTTCCAAAGAATCAAAAGAAACCATGCAAGAGTGTGTGTCAGAGTTCATCAGTTTTATAACAGGAGAGGCTTCTGATAAGTGTCAGAAAGAGAAAAGAAAGACCATCAACGGGGATGATCTTCTGTGGGCCATGGCCTCGCTTGGCTTTGAAGACTATGCAGAGCCCCTCAAAGCTTATCTGCACAAGTACAGGGAGATGGAAGGGGAAAAAACTGCTATGATTGTGAAGCACCATGGTGCTACTGGCCTTTATGCAAATCCACTGTGA 399 0.4586 MAESDNESGGGKNESSICREQDRLLPIANVGRIMKKVLPGNAKISKESKETMQECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMASLGFEDYAEPLKAYLHKYREMEGEKTAMIVKHHGATGLYANPL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02428 132 SUPERFAMILY Histone-fold 21 122 IPR009072 GO:0046982
Phco8g02428 132 MobiDBLite consensus disorder prediction 1 20 - -
Phco8g02428 132 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 24 88 IPR003958 -
Phco8g02428 132 PRINTS CCAAT-binding transcription factor subunit A signature 52 70 - -
Phco8g02428 132 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Phco8g02428 132 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
Phco8g02428 132 FunFam Nuclear transcription factor Y subunit B-3 13 130 - -
Phco8g02428 132 ProSitePatterns NF-YB/HAP3 subunit signature. 55 71 IPR003956 GO:0005634|GO:0006355|GO:0043565
Phco8g02428 132 Gene3D Histone, subunit A 11 126 IPR009072 GO:0046982
Phco8g02428 132 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 10 115 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02428 Phco-Chr8 27222450 27222848 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phco8g02428 CBFD_NFYB_HMF 2.3e-27 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02428 8 27222450 27222848 Phco11g00919 11 6791950 6792507 PCT