Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02378 ATGGAACTTTCGAGTCAAGAAGGAGAAATACCAATCCCAATAAACAGCGCTACATATGGTGGGGGACATGGTAATGGACACGGTCATGGTCTCATGATTCACCATGACCCTCCACATCACAACCACGACCACATTATCTCCTCCACGGCGCCTTCGAACGGCACACCTACTATGCAGCAGGAGGATCATGGGTACAAGAAAATGGTGAGGTACAGGGAATGCCTGAAGAACCACGCTGCGGCCATGGGAGGGAATGCCACTGATGGGTGCGGCGAGTTCATGCCGAGTGGAGAAGAAGGCACCATAGAGGCACTCAACTGCTCAGCCTGCCATTGCCACAGAAACTTCCACAGAAAGGAAGTGGAGGGAGAGCCCGCTTCATGTGACTACCACCCTTTCAACAGAAGAAGACTCATTCTGGGCCCTCACAAGAACCTCCTCCCCCCCGAGGCTCTTGGGTACCCTACAGGTAACATCCTTCCTTCTAGAAGTGTCCCACCACACCAGATGATAATGCCCTACAGCATTGGTCATCTCCCTTCAGAGTCTGATGAACAAGAAGACGGCGGAGGAATGGTGCAGCCTAGACCCTCCCAGCTAGTGAAGAAAAGGTTCAGGACAAAGTTCACCCAGGAGCAGAAGGAGAAAATGCTGAACTTTGCTGAGAGGGTTGGGTGGAAAATCCAGAAGCAGGAGGAGTCTGTGGTGCAACAGTTCTGCCAAGAGATTGGGGTTAAGAGAAGAGTGCTCAAGGTTTGGATGCACAACAATAAGCACAATCTCGCAAAAAAGAATCCCCCTACTGCAGCAGCTTAA 816 0.5135 MELSSQEGEIPIPINSATYGGGHGNGHGHGLMIHHDPPHHNHDHIISSTAPSNGTPTMQQEDHGYKKMVRYRECLKNHAAAMGGNATDGCGEFMPSGEEGTIEALNCSACHCHRNFHRKEVEGEPASCDYHPFNRRRLILGPHKNLLPPEALGYPTGNILPSRSVPPHQMIMPYSIGHLPSESDEQEDGGGMVQPRPSQLVKKRFRTKFTQEQKEKMLNFAERVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKNPPTAAA 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02378 271 SUPERFAMILY Homeodomain-like 195 263 IPR009057 -
Phco8g02378 271 FunFam Zinc-finger homeodomain protein 2 192 263 - -
Phco8g02378 271 Pfam ZF-HD protein dimerisation region 69 121 IPR006456 -
Phco8g02378 271 NCBIfam homeobox domain, ZF-HD class 202 258 IPR006455 -
Phco8g02378 271 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 70 121 IPR006456 -
Phco8g02378 271 Gene3D - 191 264 - -
Phco8g02378 271 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 71 120 IPR006456 -
Phco8g02378 271 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 55 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02378 Phco-Chr8 26393609 26394424 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Phco8g02378 ZF-HD_dimer 1.6e-28 No_clan