Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02330 ATGGCGAGTGCGGAATACGCACTCTCCTCTCTTCTCGCGTCTCACACTAACAGACGAACCCCTCGTCGTATTCTAGTTTCTTTAAAACGGCACAGGAAAAACCATTTACGACCCAAAATTCTCAAAACCCAAACCACACCCTTCCCGCTCTCACTCCCTCTTCTTCTACCTTCATCCCAGCCGCCACATCCTGTCAACATCCCACAAGAAAACAACAACCTCCGCGTTGAGATTCCCTCCGACGAGACGCTCGCCGGAGTCATCGCCGGGGAATCTGAAAATTTGGGAGAGTTACAGGTTTCCGAGGTTGTCGCGAGGGAGAATGGCGTTTCTGAGAACGTTTCCTTAACAGATGTCCTCAAATACGGGGCTATGTATTTTCTGGGGATTCTAGTGTTGCAGGCGATTTACGCCGTTTGGGCTGCAGGGTATTACAAATATAGCCACCGAGATGAGAATTTGGAGATTGATGGAAGGGGAAGTGGGGATGGGAAAACTGTGTCTTTGCCGGTTAATGGTGTTTCTGGGGAACAATTTTTAATGGAGGAGAAAATCGAGGAAATTAGGCTAATGGCGAAGGAAGTGCGGCGAATTGAATCGGAGAAGAAAGGGGAAGAGGATGTGGAGGATGAGGATTTTGAAATTGATGACGATGAAGGTGCTGTTTCTAGTCGGAGAGATGCTGTTGAGAAAGAGATTAGTGAGCGATTGATAAACCTGCTGAATAAGATAAATACGTTAGATGTTAGGACTAAGGATATTACCCCAGCGTTACAGACGGATGCTAGTGAGATTTCTGCTGCTGGAATGGATAGGGGTGTCAATAAAAATGTAAATGAGGAAGATAAGGCATTGGTGTTTAAGAAGAAGTTAAAATTTAGAAGCCCTTCAAATAAGGCTAAAAAAACTCCCAAGGGATTTCCAGGGACCCGAAATCGGAAAGCTTCTGATGCATTAAAGACGGATTCAGCGGGTGAGGAAACAGCTCTTGATTATGGAAGTGATGCTTCTAATCAAGGGCAAATGTTACGTGAAGATAAACAAGTGAATGATCGGGATGCTGCTAAGAAGAAGAGTGTTTCTAGTGTTTCTTCGGAAGAAAGGGGAAGATTAGTTGATGACGAGTTCAAAGTGATTAAAAATGATGTGAAGAATTTGAAAGAGAAGATGGAGACACCAGATATGAAGACAGATGTTGGAAATAAAACTATAAGGACTAAAAATGGTGGTGCCAAGAAGACTACTTCTGGGATGTCTTCGATGGAAGTAATACAGTCAAGAAATTCAAGAGACTTGAGTACACAAAACTCTCAGGGTTTTGTGGAAGAAAACCAGGACACAGGCATAAGTTTTGAAAAAGATGGTGTGCAGAGTATAAATGGCAGTTCAAGACATGGATTAACTAAAAAACGTTCATCGGCTAACAGAGTCAAACTCAAAGTTAAGCAAACAGAAGATACAAAGACTGATTTGTGGTGGCTGAACCTCCGTTATGTGTTTGTCATTCTCATGCGGAGAGATTCCAAGGAAGGATCAGAAGGTTTCTATAGCTTAAAGTTGACATCTAAGGAACAGGACCAGAGTGATGATTCCTTTACTGTTGCTTTTGAGGATCATGCTGATGCCAACAACTTCTGTTTTCTTTTGCAATCCTTTTTCGAAGATTTGGGGTCTTTTAGTGCTGATGCAGTTCCAATGTCAATTCAAGAACTGAAAGAAGAAATACTATCTCATGCCAAGAAAGTGGTAGTGGTGAAAAAGAGGCAGCTTCAACTCTATGCGGGGCAACCACTTGCTGATGTTGAGATGGCCCTCCGCGCCATAATAGAACAAGGTCAAAATATTTCAAGCGTCTCAAAGCAGCAACAACAGAAAAGAAAAATTGATCCAGAATTCACTTCTAATCCAAAACTTGTGAGAATTCGCTCAAAAGACTCGATACAGTGTGCTTTTGATGTACAGTGCAGCATGGAGGAGCCTCAGTATCGGGAACATCCCAAAACCAAAATCACCGCCATTCCGCCGCCGCAGCACTCCGACGGCGCCTCCGGGGAGTTGCGCGGCGTCGATTGCAACCTCGCCTCCCTCTGCGAGCATGTCCAAATCGAAGGCTTCAATTCGGGTTCCTTCTCCGATATCGTCGTCAATGCCATGGGTTCCACTTATCACCTTCATCGGCTTATCCTCTCGCGCAGTTCCTATTTCAGGAACATGCTTCACGGGCCTTGGAAAGAAGCCAGTGCTCCTTTGGTGACTCTGCATGTTGATGATAAGAATGTTAATAATGAGGCAATTGCAATGGCTTTGGCATACCTATACGGGCACCACCCTAAGCTTAATGATAATAATGCATTTCGTGTTCTTGCTGCTGCATCCTTCCTTGACCTTCAGGATTTATGTGGAATTTGTACAGATTTCATTATATCTGAGCTGTGGACTTCAAACTTCTTGGCTTATCAGGTGTTTGCCGAGAACCAAGACTATGGCATTCATGGGGAGCGTGTTAGAACTGCCTGCTGGGGTTACCTTTGTCAAAGTGGTGGAATGGAATTGAAAGAGGTGCTTCCTAAACTTTCATCGCAAACATTACATGCATTACTGACTTCTAATGATCTATGGATACCCAATGAAGAGAGACGGTTTGAATTGGCTTTGCACACATTCCTGGCAAAAGGTGCTCATTGCAAGGTTGAACATCCTTCGCATGGAATTTCTGGTTCTGAGTCTGCCAGTGGTATTCATGCTGATTCTAACAGCAAGGGAAAAAGTGTAATTGATAGCTGCACTAGCAAGAGGTTGGAAACTGACATTGGGAAAATTAATCTTAAAAGTGATCTAAAGGACCCTAGCACTCCAAGTGCTCTAATTGAGCTTGCAGATCCAGTGGCAGACTTCAACAATGGTGTTTCTGTTTCGAATGAACAGGTTCAACAAGCTTCATATGTCAGTTCACCAAACCTGAATCCAAGATATTCTAGTGACGTGGAAGGAACATCATTGGGTAATTTGTTGCCTGATACAGATGGGATGAGAACATCATGCCATGTGGAGATGTCTCTTGATGATGGAGCAACCGCTGTGGCAGCCCCTGGAGTGGGTATTGAAGGACCATCTGAAGAAGGACCTTGCTACCAGTTGGAGGACAATAGTTGGTTAGTTGGGGATCCATCAAGACAATGCTTTTCGTCAAATTCTTGTAATGAGCTCAATTCCAGTGATTGGGGAAGATATGTTTCATGGAATGACCAAGTTGTTGGCAGAAGACAGCTTAAAGCTCACCCCAGAGGAAACTACAGAGGTCATGGGGATGAATATGATGCATTTTTCAATATATTTGAAGGGGGGTCCCTTTTATACTGCAATATGTCTTTTGATGCGCTTCTAAATGTCAGAAAGCAACTTGAAGAATTAGGTTTCCCTTGCAAAGCTGTAAATGATGGTCTTTGGCTGCAGATGCTTCTTAGTCAGAGAGTACAAGAAATTGCGGCTGATACATGCAAAGTTTGCTCCCTCATGAATTGTACTTGTCAGAAGCAATTTGCATTTTCACATGGAGCTCCTACAACTGGATCTTACATGCAAGAACATAATCAAAACATTATGCCTGGCAATATGGGAAATATATATGTTGCTGAATCTTCTGCTGGTGAAAGAAATGGCCTTTTTAGACCTGTACGAGTGCATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGACGTGGAACTACTTTTGTTCCGGCATCTGCTTCGCCTCCTACACGTTTTGTCTTTTCTCGTGTACCATTTGGTGTTGGCAACAGGAACTATCCTCAGTCTGCAGCCAATGATGATTCAGAGACACGTGCTGACCCAAATGGAGACCTGTCTGGAGATGGATTGACAGCTGTAGTTGGTTTAAGCCTGGGAGGGACGAATGGAACAAATGTACATACAGAGCTAACACAAAGGGGATATGAAATGTGCATGCAAAGCAGCATGTCCGGAAGTAATGCTGGAGATGCAAGTACTGGTGGTATCCCCATGCAGATGTTAGAGACACCAGAACATACCATTGGTATAGAATGGGACAATGTCAACAGTACTTCTATATCCCTGGATATGAAAACACCTTTAAGCCATTTCCCCCCTTTTCGCTTTGGTGTACGTTTTGAGGATGTGCATAGGCTTGGTGATGGCCAGGTCAAGCATTCTACAGAAGTTTTCTACGCTGGTTCTTTGTGGAAGGTCAGTGTACAAGCTTTTAATGATGAAGACCCCCAGGGACGGCGAACCCTTGGGTTGTTTCTTCATCGTCGGAAAGCAGAGATAACTGATATGCATCGAAAGGTGCACATGTATGTTGACTCACGTGAAAAGGTGACTGCACGCTACCAGTTGACTGTCCCATCCAAGAGGGAAATGATGGTGTTTGGAAGCTTTAAACAAACAGGCACACTTCTACCTAAATTTCCCAAGGGATGGGGTTGGCGAACTGCTCTGCTATTTGATGAGCTTGCTGATCTTCTCCAAAACGGTGCCCTAAGGGTCATTGCTGTAGTGCAACTTGTATGA 4554 0.4394 MASAEYALSSLLASHTNRRTPRRILVSLKRHRKNHLRPKILKTQTTPFPLSLPLLLPSSQPPHPVNIPQENNNLRVEIPSDETLAGVIAGESENLGELQVSEVVARENGVSENVSLTDVLKYGAMYFLGILVLQAIYAVWAAGYYKYSHRDENLEIDGRGSGDGKTVSLPVNGVSGEQFLMEEKIEEIRLMAKEVRRIESEKKGEEDVEDEDFEIDDDEGAVSSRRDAVEKEISERLINLLNKINTLDVRTKDITPALQTDASEISAAGMDRGVNKNVNEEDKALVFKKKLKFRSPSNKAKKTPKGFPGTRNRKASDALKTDSAGEETALDYGSDASNQGQMLREDKQVNDRDAAKKKSVSSVSSEERGRLVDDEFKVIKNDVKNLKEKMETPDMKTDVGNKTIRTKNGGAKKTTSGMSSMEVIQSRNSRDLSTQNSQGFVEENQDTGISFEKDGVQSINGSSRHGLTKKRSSANRVKLKVKQTEDTKTDLWWLNLRYVFVILMRRDSKEGSEGFYSLKLTSKEQDQSDDSFTVAFEDHADANNFCFLLQSFFEDLGSFSADAVPMSIQELKEEILSHAKKVVVVKKRQLQLYAGQPLADVEMALRAIIEQGQNISSVSKQQQQKRKIDPEFTSNPKLVRIRSKDSIQCAFDVQCSMEEPQYREHPKTKITAIPPPQHSDGASGELRGVDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAPLVTLHVDDKNVNNEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCGICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELKEVLPKLSSQTLHALLTSNDLWIPNEERRFELALHTFLAKGAHCKVEHPSHGISGSESASGIHADSNSKGKSVIDSCTSKRLETDIGKINLKSDLKDPSTPSALIELADPVADFNNGVSVSNEQVQQASYVSSPNLNPRYSSDVEGTSLGNLLPDTDGMRTSCHVEMSLDDGATAVAAPGVGIEGPSEEGPCYQLEDNSWLVGDPSRQCFSSNSCNELNSSDWGRYVSWNDQVVGRRQLKAHPRGNYRGHGDEYDAFFNIFEGGSLLYCNMSFDALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKVCSLMNCTCQKQFAFSHGAPTTGSYMQEHNQNIMPGNMGNIYVAESSAGERNGLFRPVRVHVRGAIDGLAGIGRGTTFVPASASPPTRFVFSRVPFGVGNRNYPQSAANDDSETRADPNGDLSGDGLTAVVGLSLGGTNGTNVHTELTQRGYEMCMQSSMSGSNAGDASTGGIPMQMLETPEHTIGIEWDNVNSTSISLDMKTPLSHFPPFRFGVRFEDVHRLGDGQVKHSTEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDMHRKVHMYVDSREKVTARYQLTVPSKREMMVFGSFKQTGTLLPKFPKGWGWRTALLFDELADLLQNGALRVIAVVQLV 1517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02330 1517 MobiDBLite consensus disorder prediction 904 924 - -
Phco8g02330 1517 ProSiteProfiles BTB domain profile. 711 781 IPR000210 GO:0005515
Phco8g02330 1517 SMART BTB_4 711 811 IPR000210 GO:0005515
Phco8g02330 1517 Gene3D Potassium Channel Kv1.1; Chain A 699 829 IPR011333 -
Phco8g02330 1517 MobiDBLite consensus disorder prediction 395 436 - -
Phco8g02330 1517 MobiDBLite consensus disorder prediction 1269 1289 - -
Phco8g02330 1517 MobiDBLite consensus disorder prediction 295 369 - -
Phco8g02330 1517 Pfam BTB/POZ domain 705 809 IPR000210 GO:0005515
Phco8g02330 1517 MobiDBLite consensus disorder prediction 345 369 - -
Phco8g02330 1517 SUPERFAMILY POZ domain 705 809 IPR011333 -
Phco8g02330 1517 MobiDBLite consensus disorder prediction 402 436 - -
Phco8g02330 1517 MobiDBLite consensus disorder prediction 201 226 - -
Phco8g02330 1517 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 626 1517 - -
Phco8g02330 1517 Coils Coil 181 201 - -
Phco8g02330 1517 MobiDBLite consensus disorder prediction 900 924 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Phco8g02330 BTB 2.1e-13 CL0033