Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02312 ATGAACCTAAGGAGCAATAGAAACCTTAAAACTCCGAAAGAAAACGCGAATTCCATCGAGAAATTCGATTCAAAACAAAAGAAACTTCGTCTCTCTCCATCTCCAAGCGTTGCCACTGAAGAGTGCGCGGTACTGAGGGTTGTTGCTGGAGACGCACGAATCTTGTGCGGTGGTGTGTGTGCGCAACAAAACATTTTATGCGATTGTGTGCGACGGTGGTGCTGTGAGCAGTTGTGGTTTGCTGGCGGGGTTGTTCTTGCAGCAACTTGTTATGAAATCTGGTCTGCATTTGGAGGTGTGACGGTGGGTGGTGCGGTCGTGAGTGAAGCCCATAGGCTGAAGTGCTTATTCTGGTGCTGGTTCCGGCTCGGAGGGTTGACGGCGCTGAAAAACAGCAAGTCCAAACGGGTGCGGCGGAAGCGGCGGATCTATCTCCATTCTCATCCCATGAACACCATTCTACGCCACCGCCTAAGGCTAAGTCCGATACCTATTCTCTATTATTTCCCCAAATCCCTTTTTCCCCAACCCTCTCTTCTTTTCTCAACAACCACTTCTGATCCCCGCACCTTCACCTTATCCTATCTCATCAACACCTGCGGCTTCTCGCACGAGGTCGCACTTAAACTATCCAAACGACTTCGTTTCGAAACCGCCCAAAAACCCGATTCCATCATCTCTTTCTTCCAAACCCACGGTTTCTCCGTCTCCCAGATCTACCGCATCTTCTCCCAAGCCCCCGATCTCATGATATGCGATCCCACCAAAAGGCTTCTCCCCAAATTCCAATTCTTAGCCTCTAAAGGCGCTACGCCCTCCGACACCGTTCTCACCGTCTCCAAGAGCCCCCGTTTCCTCCGTTACAGTCTCAACAACCACATCATTCCCATCTTCGAACTCATCCGAACGTTCTTACCCTCCGACCTCAGAGCCCTCGCTGTTCTCATCGCCTGTCCCAATTTCATTGGAGACTCTCGCGTTGCCTCCAACGTTCAGATGTTGCTCGACGCCGGAGTCACGCACTCCGGCATTCGCTACTTGCTCTGCTCTCGGCCTTCGGTTCTCTGCTCCGACCTGAGAAATGTTGTGGAGGAAGTGAAACTGTTGGGGTTTGACCCTTTGAAGCTGAGCTTCGCTTTGGCGCTTCTTGCTAAAAGGGCTGTTTCGAAACCCCTTTGGGATGCCAAAGTCGAGGCCTTGAAGAAATGGGGTTGGTCCGAGGATGACATTTTTGTTGCGTTTAAGAACCAGCCTAACCTGATGCTGCGCTCCAAGGAGAAACTTAATGCAGTGATGGAGTTTTGGGTTGGTCGGCTTGGTTGGGATCATTCCACGCTTATTGCGTCCCCAACTTTGTTTTCGTACAGTTTGGAGAAAAGGGTTGTTCCGAGGGCTTTGGTTGTGCAGTATCTTCTCTCCAAAGGGTTGGTGAAGAAGGGTGCTAGCTTGGTCACACCGTTTGGTATGTCTGATGAAATGTTTCTGCGAAAGTATGTGAAACGCTACAAGGAGGAAACGCCAAGGTTACTAGAGCTATATCAGGAGGGACAGGGAACATGCTAG 1563 0.5061 MNLRSNRNLKTPKENANSIEKFDSKQKKLRLSPSPSVATEECAVLRVVAGDARILCGGVCAQQNILCDCVRRWCCEQLWFAGGVVLAATCYEIWSAFGGVTVGGAVVSEAHRLKCLFWCWFRLGGLTALKNSKSKRVRRKRRIYLHSHPMNTILRHRLRLSPIPILYYFPKSLFPQPSLLFSTTTSDPRTFTLSYLINTCGFSHEVALKLSKRLRFETAQKPDSIISFFQTHGFSVSQIYRIFSQAPDLMICDPTKRLLPKFQFLASKGATPSDTVLTVSKSPRFLRYSLNNHIIPIFELIRTFLPSDLRALAVLIACPNFIGDSRVASNVQMLLDAGVTHSGIRYLLCSRPSVLCSDLRNVVEEVKLLGFDPLKLSFALALLAKRAVSKPLWDAKVEALKKWGWSEDDIFVAFKNQPNLMLRSKEKLNAVMEFWVGRLGWDHSTLIASPTLFSYSLEKRVVPRALVVQYLLSKGLVKKGASLVTPFGMSDEMFLRKYVKRYKEETPRLLELYQEGQGTC 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02312 520 Gene3D Transcription termination factor 3, mitochondrial 307 510 IPR038538 -
Phco8g02312 520 PANTHER CGI-12 PROTEIN-RELATED 191 504 IPR003690 GO:0003690|GO:0006355
Phco8g02312 520 FunFam Mitochondrial transcription termination factor-like 290 506 - -
Phco8g02312 520 SMART mt_12 312 340 IPR003690 GO:0003690|GO:0006355
Phco8g02312 520 SMART mt_12 240 271 IPR003690 GO:0003690|GO:0006355
Phco8g02312 520 SMART mt_12 411 442 IPR003690 GO:0003690|GO:0006355
Phco8g02312 520 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Phco8g02312 520 SMART mt_12 345 372 IPR003690 GO:0003690|GO:0006355
Phco8g02312 520 SMART mt_12 443 477 IPR003690 GO:0003690|GO:0006355
Phco8g02312 520 Pfam mTERF 395 495 IPR003690 GO:0003690|GO:0006355
Phco8g02312 520 Pfam mTERF 226 363 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02312 Phco-Chr8 25175159 25184131 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phco8g02312 mTERF 6.1e-17 No_clan