Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02311 ATGTTCATTGTTTACACCCGCACTACTCTTGGTTGTGCAAAGGTTTTCGCTTTCACAACCCTAAAATGGAGCCCTCTTCCCCAACTCCAATTTCCCAAATTCCAATTCTGCACTGCCACCTCTACCTCCCACTCACGCTCCTTCGTGGTTTCGTACCTCATCAACAACTGTGCCTTCTCCCAAGAAACCGCTCTCAAAGCTTCCCGCCAGCTTCATTATTCGAAACCCCAAAGGCCTGATTCTGTTCTCTCCTTCTTCCGAAACCACGCCTTCTCCAACTCTCATATATCTCATATCCTCCAAAGAGAGCCCTGGCTACTTTCATGCAACACCCAAAAGGTGCTGTTGCCAAAGTTTGAATTTTTGCGTTCAAAAGGTGCTTCATCCCTTGACGTTATCCACGTCGTGACCGCCTGCCCTCGTATTCTCCGGCAAAGCTTGGATAGTCATATAATCCCAACATATGAATTTGTAAGAGGTTTCCTCCAAACCTTGTTTACAGAGAAGCAAATCATTGATTTTCTGATTCGCAATCCTTTTTTACTTTATGACGGGCGTGTGGCACCTAACGTCAAATTGTTGCTTGATAGTGGAGTTACCCACTCAGAAATGGTTAAATTGCTCAAGAGATGGCCTCGTGTACTCTACCGTGGCAACTTATCAAAGGTAGTTCAGGAATTGAAGCGAATGGGCTTCGATGCTTCAGTTTCAACTTTTTGCGTAGCATTGCTTGCCAAAAGGACCGTAAACGAAAGCAAATGGGCCGAGAAGATTGACACTTATAAGAGGTGGGGGTGGTCCCAAGAACAAGTTCTTCTAGCATTTAGGAGGCAGCCTTCTTGTATGTTGGCATCCCGTGATAAAATTAATGCAGTGATGAGTTGTTGGGTGGAGCAGGCAGGTTTCAATTCATTGGACCTTGTCAAAACTCCTGTAATTATGTCACTGAGTCTCCGGAAAAGGATTGCTCCGAGGGCTCGTGTCTTGCAGTTCCTTATCTCAAAAGGTCTGGTACGGAACGATGCAAGCTTAACGGTACCATTTGTTCTGACTGAGAAGTTGTTCCTGGACAAATATGTGAAACGTTTTAAGGAGGATTCTTCTCATCTGTTAAAGCTGTACACAGAAGATACGAGTCTTGGAAATCATAAGGACAACACTTGTATGTGA 1170 0.447 MFIVYTRTTLGCAKVFAFTTLKWSPLPQLQFPKFQFCTATSTSHSRSFVVSYLINNCAFSQETALKASRQLHYSKPQRPDSVLSFFRNHAFSNSHISHILQREPWLLSCNTQKVLLPKFEFLRSKGASSLDVIHVVTACPRILRQSLDSHIIPTYEFVRGFLQTLFTEKQIIDFLIRNPFLLYDGRVAPNVKLLLDSGVTHSEMVKLLKRWPRVLYRGNLSKVVQELKRMGFDASVSTFCVALLAKRTVNESKWAEKIDTYKRWGWSQEQVLLAFRRQPSCMLASRDKINAVMSCWVEQAGFNSLDLVKTPVIMSLSLRKRIAPRARVLQFLISKGLVRNDASLTVPFVLTEKLFLDKYVKRFKEDSSHLLKLYTEDTSLGNHKDNTCM 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02311 389 PANTHER CGI-12 PROTEIN-RELATED 45 364 IPR003690 GO:0003690|GO:0006355
Phco8g02311 389 FunFam Mitochondrial transcription termination factor-like 147 367 - -
Phco8g02311 389 Gene3D Transcription termination factor 3, mitochondrial 56 162 IPR038538 -
Phco8g02311 389 Gene3D Transcription termination factor 3, mitochondrial 163 372 IPR038538 -
Phco8g02311 389 SMART mt_12 172 200 IPR003690 GO:0003690|GO:0006355
Phco8g02311 389 SMART mt_12 304 338 IPR003690 GO:0003690|GO:0006355
Phco8g02311 389 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Phco8g02311 389 SMART mt_12 272 303 IPR003690 GO:0003690|GO:0006355
Phco8g02311 389 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Phco8g02311 389 SMART mt_12 205 233 IPR003690 GO:0003690|GO:0006355
Phco8g02311 389 Pfam mTERF 83 234 IPR003690 GO:0003690|GO:0006355
Phco8g02311 389 Pfam mTERF 171 355 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02311 Phco-Chr8 25163282 25164451 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phco8g02311 mTERF 4e-15 No_clan