Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02304 ATGGTTGCAGAAATGCTGCTAAGGGCTCCGAGTTTTGCGTCTTCTTTTCTGTTTGGATGTGAGGGTTTGGGCTTAGAAAATATTTTTATTGTCTCAAATGTGAACACTCTTCCGCCACCTAATCTAGTATATCCTGATCATGGTGTTTTGACATATGGATGCATCTTTTGTGTTTTGAACCCGTCTTCATCAACATTATCTGTACAGGGAAAGGAGGTGACATTTCTGTCTGAACCGCTTTGGATTCTCAAACAATCAAGGAAATCAGTTATGGCTCCTTCTAGGAAATCTAGAAGTGTAAATAAGAGGTTTTCCAGTGTTCACGAGACTGCATCTAGTAAAGAAAAAATTACAGAGAATGGTAGCAAAAATAGGCTGAAGGCGATTCCTGGTATTCAAAAGAAGAGAAGATTGGCTGACATGTTAGGACCACAATGGAATAAGGAGGAGCTTGGGCATTTTTATGAAGCTTACCGTAAATATGGGAAAGATTGGAAGAAGGTTGCTCTTGCAGTACGTAATAGGTCTGCGGAAATGGTAGAGGCACTGTATACTATGAACAGGGCATATTTATCTCTCCCAGAGGGTACTGCTTCTGTTGTTGGACTGATAGCAATGATGACAGATCATTATAGTGTATTGGGAGGAAGTGACAGTGGTAAAGAAAGCAATGATGATGCAGAGATATCTAAAAAGTCTCAAAAGCGTCTGCGGGGAAAGCATCTAAGTGACAATAAAGCATTAGATGGGCACCTTTCAGATCATTCCCAGTCACATTCTGTTGCATCAGGTGATGGTTGCCTGTCATTGTTGAAGAAGAGACATTCTGGAATTAGGCCACATGCTGTTAGGAAAAGGACTCCCCGTGTCCCTATTTCTTATTCTATTGGTAAAGATATTGGGGAGAGGTTTTTTTCATCTGTAAGGCAGGGTTCCAAACAAATGGTTGATACTAATGATGTTACTCATAAGATTGCATTGGCATTGACCGAGGCTTCCCAAAGAGGTGGCTCTTCGAAAAATTCTGGATCACCAGAGAAGAAATTTTTATCTTCACCTGGTCTGAAAAGTGGGAAGAAGCATTCAAAATCAGAAAAAGCTGGAGCCAAGTTTTTCAGTTCTGAGTTGGATGATGGTAGTTCTGAGTTGAGTTTAGGAAGCACCGAAGGTAATAATGAAGATTACTCTAGAAAAAAAATTCATCGGAGTGGTAGAGAAATTACTGGAAGAGGAAGGAATCAAGAAAAGAAAATAAAACAATATGGGAAGAATTTAGAGCCTGAGGGGAATTTAAACAAGCATTTGAATGACATAAAGGAAGCCTCCAGTGGGACAGATGATGGTAAAAACTTTCTCAAATCCAGCTTCAACACTGATTTTGTGGATGCAAAAAATGCAAGGTCCTCTTACAAGGGTTCCAGGACGAAAAGTAAAAAGCTACTGTTGGAGAAAGATGAAGGTTCTGCTTTTGATGCTTTGAAAACTTTGGCTGATTTGTCTTTGATGCTGCCAGTAACAAACCCTGACACTGAGTCATCTGCACAGTTAAAGGAAGGGAACCATGATCTTGTTGGTAAATCTAAAATGGAAACACATAAAGTATTTCCTAAGATTGAAAGCACTGCTTCAAGTAAGTTTTCCAAGGTTTTTTCTGATAATGGAGCTGTTGTACCTGAAGCAGAGGGAACACTCCAGCTTAATGCGGGATTCAGGAAAAGGAAACAAAAATCTTTTAACTTGAAAAATGATGAAACTCATACTGGTTCTCATTTAAGTGGTTCCCAGAAAACCAAGCCCACTGATGAGGTGAAGAAATCCATGGTTAAAGGTAAGCGGTCATCTGTCGGTACAGCACATTCAAGACAACTAAAAGTGGTGAAATCCCCAGGAAATCTGTCTTCAAGCACTAATGACAAAAGGGAAAGGGATGATTCATCTTTTTCTCCCATTAAGGTTTCATCTACTAATCAAGTCAGTCCGTTAGACAGAGGAAGGCCAAGAAGAAAAATGGAAAAACCAAAACCAATGACACAAGATTTGGTGGTGTCCACAAATACTTTTAGCAGTCAACATAATAAATCAATTGCCTCACTCCCAGATGGCTCTTTTAGTCAAACGGTAAAGCTTATTAATTGTCTGTCTTCATATCAAATGCGGCGATGGTGCACTTTTGAGTGGTTTTATAGTGCTATCGATTACCCATGGTTTTCAAAGAGAGAGTTTGTGGAGTACTTAGACCATGTTGGATTGGGTCATGTTCCTAGATTGACTCGTATTGAGTGGGGCGTCATTAGAAGTTCTCTTGGCAGACCAAGAAGATTTTCAGAGCAATTTTTGACAGAGGAGAAGCATAAACTTCATGAATACAGGGAATCTGTTAGATCACACTATGCTGAAATTCTTGCTGGTACCAAGGAAGGACTTCCTACTGATTTGGCCCAACCTTTAATTGTTGGGCAGCGTGTTATTGCTATTCATCCAAAGACAAGAGAAATTCATGGTGGAAGCGTACTAACGGTTGATCATTGTAGGTATAGGGTTCAGTTTGATCAGCTTGAACTTGGGGTTGAATTTGTCACGGATATTGACTGCATGCCTTTGTATCCATTTGAAAGTATGCCTACATCTCTTATACAACACAATATCTCTTCTGCTCAAATAAACGAAAACTTTGTTGAGCTCAAGCCTAATGGAAGACTGAAACAGAGAAAGGTTGCTGGGCACACAATATTGTCCCCTAGTGAGAACTCAGATACCATAAAAAGTCTTCATATATCCGCCACTGTGCACGGAACCAGTACTTTATCAAAACAGGTTTTTTCTTCAAGCTCCAAACCACAACCGAAAGTTGTGTGCAGCGAGATTGGTAATGCCCAACTAGCATCAAGTTCTCAACCTTCTCTTCTTGAACGTGTACATTCGAAAGAAGCTGACACATTAGCTATTTCAGAGTTGAATCTTGCTTTAGACAAAAAGGAACTTGTATTATCTGAACTGAAGCACATGAATGATGGGATATCAGAGAGCCAGAAATATGGAGACAGCTCAGTAAAGGATTCAGAACTTTTTAAGAGGGATTATGCTTCAGTATTAAAGCAATTAACTGAAGCAAATGAACAGGTTTCATCTGCCTTGTTTTGCTTGAGGCAACGCAACACATATCAAGCAAGCTCCTCTGTTTTTCAATTAAAGCCCATGGCTAATTTTGATGATCCCAGTGGTCAGGCGAGCTCTTCCAATTGTTCAGCTTGCCACAACCAAGAATCAATATCTCAAAGTCATATAGCTGAAATTGTTGAAAGTTCTAGAAGAAAAGCACGGACAATGGTTGTTCAAGCTTCTCAGGCAATGTCAAATTTAAGAATGACAGAAAGTAAGGTTGAAAGAATTGAGGATGCAATAAATTTCATCAATAACCAGCTTTCAGTGGACGAACCTACTGCTTCATCCACAACTTTTGTGCCTGCAGATTCTCTTTCTCACGCTTCTCAGGATCAATTGACTGCCAGCGTATTAAATCCCTTAGCAAGTTGTCATGTACAAGATACTGAACTCAACAGTTCATCTGACCAAAATGAAATGAAAATTCCGTCAGAACTCATATCTCATTGCCTAGCTACGTTGTTCATGATTCAGAAGTGTACAGAACGACAATTTCCCCCAGCTGATGTCGCTCAAGTACTAGATTCTGCTGTCACCAGTTTGCAGCCATTATGTTCAAAGAATCTTCCAATATATGGTGAGATACAAAAATGCATGGGTATCATAAGAAATCAGATATTGGCACTCATACCTACATAG 3801 0.397 MVAEMLLRAPSFASSFLFGCEGLGLENIFIVSNVNTLPPPNLVYPDHGVLTYGCIFCVLNPSSSTLSVQGKEVTFLSEPLWILKQSRKSVMAPSRKSRSVNKRFSSVHETASSKEKITENGSKNRLKAIPGIQKKRRLADMLGPQWNKEELGHFYEAYRKYGKDWKKVALAVRNRSAEMVEALYTMNRAYLSLPEGTASVVGLIAMMTDHYSVLGGSDSGKESNDDAEISKKSQKRLRGKHLSDNKALDGHLSDHSQSHSVASGDGCLSLLKKRHSGIRPHAVRKRTPRVPISYSIGKDIGERFFSSVRQGSKQMVDTNDVTHKIALALTEASQRGGSSKNSGSPEKKFLSSPGLKSGKKHSKSEKAGAKFFSSELDDGSSELSLGSTEGNNEDYSRKKIHRSGREITGRGRNQEKKIKQYGKNLEPEGNLNKHLNDIKEASSGTDDGKNFLKSSFNTDFVDAKNARSSYKGSRTKSKKLLLEKDEGSAFDALKTLADLSLMLPVTNPDTESSAQLKEGNHDLVGKSKMETHKVFPKIESTASSKFSKVFSDNGAVVPEAEGTLQLNAGFRKRKQKSFNLKNDETHTGSHLSGSQKTKPTDEVKKSMVKGKRSSVGTAHSRQLKVVKSPGNLSSSTNDKRERDDSSFSPIKVSSTNQVSPLDRGRPRRKMEKPKPMTQDLVVSTNTFSSQHNKSIASLPDGSFSQTVKLINCLSSYQMRRWCTFEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLTEEKHKLHEYRESVRSHYAEILAGTKEGLPTDLAQPLIVGQRVIAIHPKTREIHGGSVLTVDHCRYRVQFDQLELGVEFVTDIDCMPLYPFESMPTSLIQHNISSAQINENFVELKPNGRLKQRKVAGHTILSPSENSDTIKSLHISATVHGTSTLSKQVFSSSSKPQPKVVCSEIGNAQLASSSQPSLLERVHSKEADTLAISELNLALDKKELVLSELKHMNDGISESQKYGDSSVKDSELFKRDYASVLKQLTEANEQVSSALFCLRQRNTYQASSSVFQLKPMANFDDPSGQASSSNCSACHNQESISQSHIAEIVESSRRKARTMVVQASQAMSNLRMTESKVERIEDAINFINNQLSVDEPTASSTTFVPADSLSHASQDQLTASVLNPLASCHVQDTELNSSSDQNEMKIPSELISHCLATLFMIQKCTERQFPPADVAQVLDSAVTSLQPLCSKNLPIYGEIQKCMGIIRNQILALIPT 1266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02304 1266 MobiDBLite consensus disorder prediction 217 240 - -
Phco8g02304 1266 MobiDBLite consensus disorder prediction 613 635 - -
Phco8g02304 1266 Coils Coil 1113 1140 - -
Phco8g02304 1266 Gene3D - 76 198 - -
Phco8g02304 1266 MobiDBLite consensus disorder prediction 392 423 - -
Phco8g02304 1266 MobiDBLite consensus disorder prediction 332 348 - -
Phco8g02304 1266 MobiDBLite consensus disorder prediction 578 675 - -
Phco8g02304 1266 PANTHER LIN-9 91 1266 IPR010561 GO:0006351|GO:0017053
Phco8g02304 1266 MobiDBLite consensus disorder prediction 377 391 - -
Phco8g02304 1266 CDD SANT 146 180 IPR001005 -
Phco8g02304 1266 MobiDBLite consensus disorder prediction 332 431 - -
Phco8g02304 1266 MobiDBLite consensus disorder prediction 507 527 - -
Phco8g02304 1266 SMART DIRP_2 727 828 IPR033471 -
Phco8g02304 1266 MobiDBLite consensus disorder prediction 358 372 - -
Phco8g02304 1266 SUPERFAMILY Homeodomain-like 142 189 IPR009057 -
Phco8g02304 1266 MobiDBLite consensus disorder prediction 102 122 - -
Phco8g02304 1266 Pfam DIRP 726 827 IPR033471 -
Phco8g02304 1266 MobiDBLite consensus disorder prediction 108 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02304 Phco-Chr8 25023135 25049124 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco8g02304 DIRP 1.9e-29 No_clan