Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02302 ATGAAGAAGTTCTCAACCCTAAGAATCCTTCACCATCATCTTTCTCTTCTCAATCGCAATCCACCCTTCTCCCTCTGTTTCAATTTCAAATTCGCCACCATCCCTCACGCCCACTCCTTTGTTGTCTCCTACCTCGTCTCCACCTGCGGCTTCTCCCCGGAATCCGCCCTCTCCGCCTCCCGCCACCTCCGCTTCCACAGTCCACAGAAGCCCGACTCCGTCCTCGCATTCTTCTCCGCGCATGGCTTCTCAGTCTCCCAAATCCGCTCCATCGTCAAAAGGGAAAGCCGCATCCTCCTCTGCAATCCCGACAAGGTCCTCCTCCCCAAGTTCCTCTTCCTCCGCTCCAAAGGCGCCTCCGCCGCCGACATAGTCCACATGATCACAACCGGTCCTCGCTTCCTCCTTCGCAGCCTCAATAACAACATCGTCCCCACTTACCTCTTCGTCAAAAGTTTCGTGGAATCCGACAAGCAAATCATCACCTGTCTCAAGCGCAACCTCTCCTTCATTGGCGACAGTCGCCTATCTTCCAACGTCCAAATTCTCCTGGATAACGGCGTCAAACGTTCCAGTATCGCCATGTTGTTCACCATGTGGCCCTCTATCCTCTGCACTTATAACCTGTCCCACACTGTTAGTGAATTGAAGGAAATGGGGTTTGAAACTTCCACCTCCACTTTCGCCGTGGCCATGCTCGCCAGAAGGACTGTGAATAAAGCCAAGTGGGACGACAAAGTTGAGGTTTTCAAGAAGTGGGGGTGGTCGGAGGAGCATGTGCTTGTGGCGTTTAAGAAGCACCCTTATTGCATGTTGACGGCCCGTGAGAAGACTGATGCCGTGTTCAGCTTTTGGGTTGAGGTGTTAGGGTATAACTCTTTGGAGCTTCTCAAGTATCCTGTTATTTTTCAGTTGAGTCTCCCTAAGAGGATTGTTCCCAGGTCTTTGGTTCTGAGGTTTCTTGCCAAGGAAGGTTTGCGGAAAAAGGGTGCCAGCAATTGCACGCCTATACTCGTGACGGAGAATGCGTTTCTGAATAAGTTTGTCAATTGTTTTGAGAAGCATTCTTCTCAGTTGTTGAAGATGTATGAGAAAAGTAAGAATGAAGGGAACACTGGTAAGGAGGAGAAGAATGTTTGCTTGTAG 1146 0.5035 MKKFSTLRILHHHLSLLNRNPPFSLCFNFKFATIPHAHSFVVSYLVSTCGFSPESALSASRHLRFHSPQKPDSVLAFFSAHGFSVSQIRSIVKRESRILLCNPDKVLLPKFLFLRSKGASAADIVHMITTGPRFLLRSLNNNIVPTYLFVKSFVESDKQIITCLKRNLSFIGDSRLSSNVQILLDNGVKRSSIAMLFTMWPSILCTYNLSHTVSELKEMGFETSTSTFAVAMLARRTVNKAKWDDKVEVFKKWGWSEEHVLVAFKKHPYCMLTAREKTDAVFSFWVEVLGYNSLELLKYPVIFQLSLPKRIVPRSLVLRFLAKEGLRKKGASNCTPILVTENAFLNKFVNCFEKHSSQLLKMYEKSKNEGNTGKEEKNVCL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02302 381 PANTHER CGI-12 PROTEIN-RELATED 38 352 IPR003690 GO:0003690|GO:0006355
Phco8g02302 381 Gene3D Transcription termination factor 3, mitochondrial 136 362 IPR038538 -
Phco8g02302 381 SMART mt_12 293 327 IPR003690 GO:0003690|GO:0006355
Phco8g02302 381 SMART mt_12 194 222 IPR003690 GO:0003690|GO:0006355
Phco8g02302 381 SMART mt_12 89 120 IPR003690 GO:0003690|GO:0006355
Phco8g02302 381 SMART mt_12 261 292 IPR003690 GO:0003690|GO:0006355
Phco8g02302 381 SMART mt_12 125 156 IPR003690 GO:0003690|GO:0006355
Phco8g02302 381 Pfam mTERF 75 223 IPR003690 GO:0003690|GO:0006355
Phco8g02302 381 Pfam mTERF 174 329 IPR003690 GO:0003690|GO:0006355
Phco8g02302 381 FunFam Mitochondrial transcription termination factor-like 139 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02302 Phco-Chr8 25012569 25013714 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phco8g02302 mTERF 9e-14 No_clan