Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02293 ATGGGTTGTGTTCTCTCGTATGCTAAAGAATTATTCAACATGGGGGAATCTGGGGACACGCCAGTTACAGTTGCTGGCTCTAACACAGATGGAAGAACAATATCGGAGACTGGGAGTGGTCCAACAGCCAGTAAAACTGCAAAAGTATTTACATTCAGAGAGCTTGCAACTGCTACAAAGGATTTTAGGTCAAAATTTTTGTTAGGTCAAGGGGGCTTTGGGCGTGTGTACAAAGGTCAACTTAGGAACGGCCAAGAAGTTGCTGTGAAACTGCTTGACAGAAGTAGCCAACAAGGAGACCAAGAATTTTTTGCTGAGGTTGAGATGCTGTCTCTCCTACATCACCCAAATCTGGTGACATTGATTGGTTACTGTTCAGAACGTGATCAGAGGGTACTTGTCTACGAGTATATGCCATTGGGGTCTTTGGATGATCATTTATACGATGTTCCTGTTGACAAGGCACCCCTTGATTGGAAAACAAGGATGAAGATAGCAAATGGTGTGGCAAAGGGATTGGAGTATTTGCATGTTTGCGCAGACCAACCTGTGATATTTAGAGACTTCAAACCATCGAACATCCTCTTGGGCGAGGGTTATCATCCCGTGTTGTCTGATTTTGGGGTGGCAAAATTTGGTCCCGTTGGTGATAGCAATCATGTTTCTACGCGAGTGGTGGGAACATATGGTTACTGTGCTCCAGAATACATGTTGACTGGTCACCTAACTCCGAAATGTGATGTCTACGGTTTTGGAGTGGTCCTCCTCGAACTCATTTCGGGGCGCAAGGTCATTGACAAGACTCGTTCACCTGATATGCGTAATCTTGTTATGTGGGCGCAACCTATTTTCAAGGACCCTAATCAGTTCTATAGATTGGTCGACCCTCTTCTTCCGGGGTGGTCCATCATCCTTATTGTCGCCATCTCCATGTGCTGCATTGGCAGAAAAGGAAGTGGGTTGGATAAACTAGAAAAGAAACGTGAATCTAAGAGAGGCAATAGCGGCTGTGCTGCAGATACTGGAAGAGCTAGAGAAACTCCAGGCAACCCTGAAGTGAAAACACAACCTGCAGTTGAAGAAAGGGGTGAGAAATTGAAGTAG 1104 0.4529 MGCVLSYAKELFNMGESGDTPVTVAGSNTDGRTISETGSGPTASKTAKVFTFRELATATKDFRSKFLLGQGGFGRVYKGQLRNGQEVAVKLLDRSSQQGDQEFFAEVEMLSLLHHPNLVTLIGYCSERDQRVLVYEYMPLGSLDDHLYDVPVDKAPLDWKTRMKIANGVAKGLEYLHVCADQPVIFRDFKPSNILLGEGYHPVLSDFGVAKFGPVGDSNHVSTRVVGTYGYCAPEYMLTGHLTPKCDVYGFGVVLLELISGRKVIDKTRSPDMRNLVMWAQPIFKDPNQFYRLVDPLLPGWSIILIVAISMCCIGRKGSGLDKLEKKRESKRGNSGCAADTGRARETPGNPEVKTQPAVEERGEKLK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02293 367 FunFam Os07g0541700 protein 138 228 - -
Phco8g02293 367 ProSiteProfiles Protein kinase domain profile. 62 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g02293 367 SUPERFAMILY Protein kinase-like (PK-like) 39 306 IPR011009 -
Phco8g02293 367 Gene3D Phosphorylase Kinase; domain 1 27 137 - -
Phco8g02293 367 ProSitePatterns Protein kinases ATP-binding region signature. 68 90 IPR017441 GO:0005524
Phco8g02293 367 Gene3D Transferase(Phosphotransferase) domain 1 138 319 - -
Phco8g02293 367 PANTHER OS07G0668900 PROTEIN 41 315 - -
Phco8g02293 367 MobiDBLite consensus disorder prediction 324 367 - -
Phco8g02293 367 FunFam Serine/threonine-protein kinase CDL1-like 34 137 - -
Phco8g02293 367 Pfam Protein kinase domain 66 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02293 Phco-Chr8 24834907 24837049 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phco8g02293 Pkinase 1.4e-44 CL0016