Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02288 ATGCAAGGTCACACTACAGAAAAGGAAACTGAAACTCACTCTACCATGCCACCGCTCTCTCAAATCCCACCTTCTTCTTTTCTTCTCCCTTCAACCATTGCTGAAAACACAGCTAACACAGCCTCCAGAAAGCGTGTTAAGAGAATAATGGGTCAGACCAATTGCGAGAGCCTTAACATGGAACGTGAAAGAAGGTCCAAGATGACTCAAATGTTTACTCAGCTTCAAACCTCGGTCCCTGGTCTCTTACCTAAGGCTACAAGAGAAGTGATAATAAACGAGACAATTGGGTACATAAAAGAGCTTGAGAAGAAGAAGCAGAGATTAGAGGAGTTGAAGGAGACTATGAAAGGAGTTGAAGGGTCCACGGTTGAATGTGGTAACAACAATAGAAATTGTTCAATCATGGTTACTGTTTCTGCTAATGTTGCATTCTTTGGTATTCAATGGGTGCCTCGACCAGGTTTGGTGACACAAATTTTAAAGGTGTTTTGCAATCACCAAGCAGAGATTTTGGCTGCAAATGTGTCTGTTAATAATGGGAAATTGATTTTGGCAATCACAGCTTTGGTGCAAAATAATGGAAAGTGTGTGGTTGAAAATATTAAAAGAGAAATTATGGGTTTGTAG 630 0.4048 MQGHTTEKETETHSTMPPLSQIPPSSFLLPSTIAENTANTASRKRVKRIMGQTNCESLNMERERRSKMTQMFTQLQTSVPGLLPKATREVIINETIGYIKELEKKKQRLEELKETMKGVEGSTVECGNNNRNCSIMVTVSANVAFFGIQWVPRPGLVTQILKVFCNHQAEILAANVSVNNGKLILAITALVQNNGKCVVENIKREIMGL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02288 209 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 39 192 - -
Phco8g02288 209 SMART finulus 58 108 IPR011598 GO:0046983
Phco8g02288 209 MobiDBLite consensus disorder prediction 1 27 - -
Phco8g02288 209 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 52 102 IPR011598 GO:0046983
Phco8g02288 209 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 59 116 IPR036638 GO:0046983
Phco8g02288 209 Coils Coil 92 122 - -
Phco8g02288 209 Gene3D - 58 121 IPR036638 GO:0046983
Phco8g02288 209 MobiDBLite consensus disorder prediction 12 27 - -
Phco8g02288 209 Pfam Helix-loop-helix DNA-binding domain 60 103 IPR011598 GO:0046983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phco8g02288 HLH 1.8e-05 No_clan