Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02284 ATGGGGTGTGTGTTTGGGAAAAGAACGTCAAGGAGGAAAGAGGAAGTGAAAGTTGAAAGAGCAGAAGAGGGTGCTGTTCAGAACGGTGGGAATGTTAAGGAGGGTGGAGAAGAGGAAAAGAGCAAGCCCCCTAAAGGGGAGAGAAGGCGATCTTCGAAGCCGAATCCGAGGTTAAGCAATCCACCTAACCATGTGCATGGTGAGCAAGTAGCTGCAGGGTGGCCCTCTTGGCTCTCCAAGGTTGCTGGGGAAGCTATAAATGGGTTGATCCCTAGAAGAGCCGACACTTTTGAAAAGCTGAATAAGGTTGGACAAGGTACATATAGCAATGTTTACAAAGCAAAGGATACTTTGACAGGGAAAATTGTTGCCCTAAAAAAGGTCCGCTTTGACAATTTAGAGCCCGAGAGTGTCAAATTCATGGCCAGAGAGATCCTTATTCTGCGCCATCTGGATCATCCTAACGTTGTCAAACTGGAAGGTTTAGTGACTTCGAGGATGTCATGCAGTTTGTACCTTGTGTTTGAATACATGGAGCATGATTTGGCTGGACTTGCTACAAGTCCAACAGTAAAGTTCACAGAGTCTCAGGTTAAATGTTATATGCATCAGCTACTTTCTGGACTGGAACACTGTCACAACCGTCATGTGTTGCATCGTGACATAAAGGGGTCAAACCTTCTTATTGACAACGATGGAATTCTTAGAATTGCTGATTTTGGATTAGCTTCCTTCTTTGATCCTAATCAAAAGCACCCTATGACCAGCAGGGTGGTTACTTTATGGTATCGACCTCCAGAGCTTCTCCTTGGAGCCACTGATTATGGTGTAGGAGTGGACCTCTGGAGTGCTGGCTGCATTCTTGCTGAATTGTTGGCTGGCAAGCCTATTATGCCTGGTCGAACCGAGGTGGAGCAGCTACATAAGATATTTAAGCTTTGTGGTTCTCCTTCTGATGAATATTGGAAAAAATCAAAGCTGCCACATGCTACCATTTTTAAGCCCCGACAATCATACAAGAGGTGCATACAAGAGACATTTAAGAATTTCCCAGCATCATCTCTGCCACTAACTGAGACCCTTCTTGCAATCGATCCAGCTGAACGCCAAACTGCCACAGCTGCATTACATAGTGAATTCTTTACTACAAAACCTTATGCCTGTGAACCCTCTAGCCTTCCAAAATATCCTCCCAGCAAGGAGATGGATACAAAACTGCGGGATGAAGAAGCTAGAAGATTGAGGGCTGCTAACAAAACTAATGCTGGTGTAAAGAAATCACGGCCACGTGATAGAGGTGGAAGGGGAATTCCAATTCCAGATACCAATGCTGAGTTGCAAGCAAATATTGATAGATGGCGACTGGTAACACATGCAAATGCCAAGAGCAAGAGTGAAAAGTTTCCTCCTCCTCATGAAGATGGAACTCTAGGCTATCCTTTGGGTTCTTCACGTCACATGGATCCAATTTTTGATCCTCCTGATGTTCCATTTAGTTCCACAAACTTGTCATATCCTAAATCAAATATCCAGACTTGGTCTGGTCCATTAACGGAAACTAGTGTGGTGGATGCACCAAGAAGAAAGAAGAAGATGGCAGGGAATGGGAATGGACGCACACATTCAAAGAAAGACTCCTATAGATAG 1647 0.4451 MGCVFGKRTSRRKEEVKVERAEEGAVQNGGNVKEGGEEEKSKPPKGERRRSSKPNPRLSNPPNHVHGEQVAAGWPSWLSKVAGEAINGLIPRRADTFEKLNKVGQGTYSNVYKAKDTLTGKIVALKKVRFDNLEPESVKFMAREILILRHLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLATSPTVKFTESQVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLIDNDGILRIADFGLASFFDPNQKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKSKLPHATIFKPRQSYKRCIQETFKNFPASSLPLTETLLAIDPAERQTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDTKLRDEEARRLRAANKTNAGVKKSRPRDRGGRGIPIPDTNAELQANIDRWRLVTHANAKSKSEKFPPPHEDGTLGYPLGSSRHMDPIFDPPDVPFSSTNLSYPKSNIQTWSGPLTETSVVDAPRRKKKMAGNGNGRTHSKKDSYR 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02284 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Phco8g02284 548 MobiDBLite consensus disorder prediction 497 519 - -
Phco8g02284 548 FunFam probable serine/threonine-protein kinase At1g54610 180 421 - -
Phco8g02284 548 Gene3D Phosphorylase Kinase; domain 1 86 179 - -
Phco8g02284 548 MobiDBLite consensus disorder prediction 1 68 - -
Phco8g02284 548 Gene3D Transferase(Phosphotransferase) domain 1 180 421 - -
Phco8g02284 548 ProSitePatterns Protein kinases ATP-binding region signature. 103 126 IPR017441 GO:0005524
Phco8g02284 548 MobiDBLite consensus disorder prediction 7 22 - -
Phco8g02284 548 SUPERFAMILY Protein kinase-like (PK-like) 92 386 IPR011009 -
Phco8g02284 548 Pfam Protein kinase domain 97 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g02284 548 PANTHER CELL DIVISION PROTEIN KINASE 95 385 - -
Phco8g02284 548 ProSiteProfiles Protein kinase domain profile. 97 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g02284 548 CDD STKc_CDK9_like 97 381 - -
Phco8g02284 548 MobiDBLite consensus disorder prediction 33 54 - -
Phco8g02284 548 SMART serkin_6 97 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g02284 548 FunFam probable serine/threonine-protein kinase At1g54610 84 179 - -
Phco8g02284 548 MobiDBLite consensus disorder prediction 417 443 - -
Phco8g02284 548 MobiDBLite consensus disorder prediction 461 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02284 Phco-Chr8 24717626 24721754 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phco8g02284 Pkinase 8.7e-68 CL0016