Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02247 ATGGCCTCTCCTCCCCCACCCCCCGACCCCCCTTCCGCCGTACCCCTAGCCCTTCTCCCCCTCCCCCTTCCCCTCCCCGCGCCCCCCTCCTCCCGCCGCCTCCCTCCTCCCTGTTGGTCACCCGATGAAACCCTCGCCCTCATCGACGCCTACCGTGACAAGTGGTATTCCCTCGGCCGCGGCAACCTCAAGGCCACCCACTGGCAAGAGGTCGCCGACGCCGTAGCCAACCGCTGCCCCAACGCCTCTCCTCCCAAAACCCCCGTCCAGTGCCGCCACAAAATGGAGAAGCTTCGCAAGCGCTACCGCACCGAGATCCAACGCGCTCGCTCCCTCCCAGTCTCCCGATTCAACTCCTCCTGGGTCCACTTTAAGCTCATGGACTCCATGGAGAAAGGTCCCTCTCCTGTCAAACCCGAACACGATTCCGATAGTGACAACGATGATGACGACAACGACGATGATCAAGATCTGTACCAGGAGATCAGCCACAACGGCCACACCCGGAGCTTGAACAAGTTGTACAGGAATGGGTTTCCGGGTGTCGGTGCGGGTGGGTTTAGGATTCGAATTCCCACCGGGATGGCCCCTGCTCAACCCGGGTCTGGCTCCAAGATGTTTGGGAAGGTTGGGAATCAGAAATTCAGCCCTAATTTGAATCAAAACCCTAACCCTAATTTTGGGAAGAAGAGAGAAAGAGACCCGGTGGGGGAGATGGTGGCAGCGATTAAGGTTTTAGGAGATGGGTTTGTGAGGATGGAACAGATGAAGATGGAGATGGCGAGGGAGATTGAGAGCATGCGGATGGAGATGGAAATGAAGCGCACTGAGATGATTCTGGAGTCACAACAACGGATTGTTGAAGCCTTTGCCAAGGCAGTTTCAGAAAAGAAGAAGGCCAAGACTGTGTCTTCGCCGCAGCAGCCCTAA 930 0.5742 MASPPPPPDPPSAVPLALLPLPLPLPAPPSSRRLPPPCWSPDETLALIDAYRDKWYSLGRGNLKATHWQEVADAVANRCPNASPPKTPVQCRHKMEKLRKRYRTEIQRARSLPVSRFNSSWVHFKLMDSMEKGPSPVKPEHDSDSDNDDDDNDDDQDLYQEISHNGHTRSLNKLYRNGFPGVGAGGFRIRIPTGMAPAQPGSGSKMFGKVGNQKFSPNLNQNPNPNFGKKRERDPVGEMVAAIKVLGDGFVRMEQMKMEMAREIESMRMEMEMKRTEMILESQQRIVEAFAKAVSEKKKAKTVSSPQQP 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02247 309 Pfam Myb/SANT-like DNA-binding domain 37 130 IPR044822 -
Phco8g02247 309 Gene3D - 39 104 - -
Phco8g02247 309 Coils Coil 257 277 - -
Phco8g02247 309 Coils Coil 92 112 - -
Phco8g02247 309 FunFam Trihelix transcription factor ASIL2 39 104 - -
Phco8g02247 309 ProSiteProfiles Myb-like domain profile. 39 99 IPR001005 -
Phco8g02247 309 MobiDBLite consensus disorder prediction 130 158 - -
Phco8g02247 309 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 12 296 IPR044823 -
Phco8g02247 309 SMART 118neu2 46 135 IPR006578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02247 Phco-Chr8 24269567 24270496 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phco8g02247 Myb_DNA-bind_4 2e-21 CL0123