Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02176 ATGAAGCTATTTGGTTTCTCCTTCAACTTGAAGCCTGCCATACCCTGTGAAGATGGTGCAAAGAGGTTCCACTGCCGATACTGTCGCCGCCAATTCACAAATTCTCAAGCACTTGGAGGACACCAAAATGCTCACAGGAGGGAACGTGCTAAGTTAGCCCAGTTCAAATACCTTCTCCATCTTCGACAACACCATGGCCATAGCTTCAAACCACCATCCACCAATGGAGCAAAAGGGTCTTCGCTTCAACATCCAAATGGCTCACCCAACGTTAGTGTTGGTAGTGCAACTAGTGCAGCTTTATTTCAATTTCCTGGTGCAGGGACACTGCTCCTGCAAGTACCTCGTGACGATCACGTGGATCTCAACCTCAGACTGTAG 381 0.4829 MKLFGFSFNLKPAIPCEDGAKRFHCRYCRRQFTNSQALGGHQNAHRRERAKLAQFKYLLHLRQHHGHSFKPPSTNGAKGSSLQHPNGSPNVSVGSATSAALFQFPGAGTLLLQVPRDDHVDLNLRL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02176 126 SUPERFAMILY beta-beta-alpha zinc fingers 19 50 IPR036236 -
Phco8g02176 126 PANTHER ZINC FINGER PROTEIN GIS 17 66 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Phco8g02176 126 MobiDBLite consensus disorder prediction 68 92 - -
Phco8g02176 126 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Phco8g02176 126 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Phco8g02176 126 MobiDBLite consensus disorder prediction 65 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02176 Phco-Chr8 23375458 23375838 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco8g02176 None None None