Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02149 ATGGTTGACACTTTCAGTGTAGAGAGCAGGGTTCATATAAGAGAGTTTGATGAAGATAGAGATGTTAAGGTGGTGGGGAAGCTTGAGAGGAAGTGTGAGATTGGGACTAAAAAGGGGGTCTCCATTTTCACCAACATGATGGGTGACCCTTTATCTAGGATTAGGTTCTATCCCCTTCATGTTATGTTGGTGGCTGAGCTGCTTGAAAGCAAGGAGCTTGTGGGTGTGGTTCGAGGGTGCATTAAGAGTATGAGAACTCCTTCTGAATCATTGCTGAAGATAGGTTGCATACTAGGCCTTAGGGTCTCTCCTTCACACAGGAGAAAGGGGATAGGACTAAAACTTGTGACCTCAGTTGAAGAATGGATGCTGAGAAATGGGGCTGAATATGCATTCTTGGCCACTGAAAAGAACAACGATGCCTCTAGAAACCTATTTACCAACAAATGCAAATATGTGAGCCTCAGCTCACTTTTCATATTTCTGCATCCAATTAGTTTCCCTGCAAAGAACATTTCCAAGGATATAGAAATTGAGAAGGTAAACATAGACCAGGCAATTTCCTTATACAGGAGAACCCTGAGGGCCAAAGAGTTGTACCCATTAGACATGGATAGTATTTTGAAGGAGAATCTCAGCTTGGGCACCTGGGTGAGTTATTACAAAGAGGGAGGCTTACTCAACTTACAGAGAAAGGAAGAGAGTGAAGATATTATTACCAACGAAATCGCAAGCTCATGGATCATCTTTAGCATATGGAATACTTATGAGGCTTATAAGCTTCAACTTAAAAAGTCTCAGCCACTTAGGTTTCTTCACACAACAATAAATCATGCAAGAGACAAAATTTTCCCTTGTCTGAGAATGTCGGTGAGTGACTCACTCTGCAGACCCTTTGGGTTTCTCTTCCTCTATGGGCTCCATGGAGAGGGAGAGAACCTTGGGGAGCTAATGGAATCCATATGGAGGTTCGCATCAAGAATGGGAGAAAGTTTGAAGGACTGCAGAGTGGTTATAACCGAGCTAGGGTTTGGGGATCCACTTGTAAACCATGTCCCTCAAACAGCTTCTATGTCGTCTATCGATGATATTTGGTACACCAAAAGAATTTCAAGCCACAGTGACGAAAAGGATGATGAACTGCTGATTAAGAGACAAATCGGGAATGTGTTTGTTGACCCTAGAGATTTTTAG 1194 0.4263 MVDTFSVESRVHIREFDEDRDVKVVGKLERKCEIGTKKGVSIFTNMMGDPLSRIRFYPLHVMLVAELLESKELVGVVRGCIKSMRTPSESLLKIGCILGLRVSPSHRRKGIGLKLVTSVEEWMLRNGAEYAFLATEKNNDASRNLFTNKCKYVSLSSLFIFLHPISFPAKNISKDIEIEKVNIDQAISLYRRTLRAKELYPLDMDSILKENLSLGTWVSYYKEGGLLNLQRKEESEDIITNEIASSWIIFSIWNTYEAYKLQLKKSQPLRFLHTTINHARDKIFPCLRMSVSDSLCRPFGFLFLYGLHGEGENLGELMESIWRFASRMGESLKDCRVVITELGFGDPLVNHVPQTASMSSIDDIWYTKRISSHSDEKDDELLIKRQIGNVFVDPRDF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02149 397 CDD NAT_SF 62 133 - -
Phco8g02149 397 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 147 IPR016181 -
Phco8g02149 397 Gene3D - 12 161 - -
Phco8g02149 397 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 397 - -
Phco8g02149 397 Pfam Acetyltransferase (GNAT) family 65 150 IPR000182 GO:0016747
Phco8g02149 397 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 209 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02149 Phco-Chr8 23043124 23044704 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco8g02149 Acetyltransf_1 2.2e-14 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02149 8 23043124 23044704 Phco8g02149 8 23043124 23044704 ECH
Phco8g02149 8 23043124 23044704 Phco11g01180 11 8832213 8834044 PCT