Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02145 ATGGGAACTCCACCAACGGATGAACTCGTGAAGAAGATCCAACAGTTAGAAGAAGGACACGCGCACTTGAAGCAAGAAATGTCAAAGCTCAAACTCTCCGATGTGAGACACGGACATCGCCAGAGGTCGCACTCCGTCTCTCCGCAGCGTTCCAGGTTGGGCGCTCCCCCGAGAAGGCGGACCGATGCACCGGCGGCTGCGTGGAAGAGAGGTTCGTGTTCCTTTAAACAATCCTCGCCGCTGCAGAGAGAGAGCCGCGGCGGCGGGGATCCTCAAATTCACGGCGGCAGCGGAGGAGGAGGAGGAGGAGGAGAAGGAGAAGGTGCTACTCCGCGCCGTGGTCCTTCCGCCGTGAATTTCACGGAACGACAGTATCTTAATATTTTGCAGTCAATGGGACAGTCTGTTCATATATTGGATCTTAACTGTCGCATAATATACTGGAACCGTAGTGCGGAAAATCTGTATGGTTATACAGCAGAGGAAGCTTTAGGGCGGGATGGGATTGAGCTGCTTGTGGACCCTCGGGATTTGGGCTTGGCCAATGATACAGTTAACCGTGTGATGGTGGGAGAGAATTGGACGGGGCAATTTCCCGTCAAGAATAAGATGGGAGAGAAGTTCTTAGCTGTAGCGACTAATACACCTTTCTATGATGATGATGGAAGCTTAGTTGGGATAATTTGTGTCTCTTGTGATTCACGGCCCTTTCTTGAAATGAAAGTTCCGATGTCTGGTGTAAGGAACACTGAGTCGGATTTGGACTCGGGTGGAACTCGATCTAGAAGTAGCATTACGAATAAACTTGGCATTGACACTCAGCAGCCACTTCAAGTTGCTATTGCGTCAAAAATTTCAAATTTGGCATCAAAGGTGAGTAACAAAGTAAGGTCAAGGATCTGGACGGGAGAAAATAATGTGGATCGTGAAGGTGGGAGCGGTGAAAGTCATAATTCTGAGCATAGTTTGTTGGAATCTGTTCTTTCGGACCAGAGAGAGGATGCTAATTCCAGTGGAGCTAGCACCCCCAGAGGTGATGTGCCACCGTTCCATTTTGGTGTGTTTTCTCATGGTGAAGAAAAATCCCAGGGAAAATCTTCGAGAGAGTCTGGTGACGAAAGTGAAGGAAAATCTATTCACAAGAGCATACCGGCTAAGGCTGAAGCCTGGATTCAAAGGAAAACATTATCATGGCCATGGAGAACAAAGGACCGAGAAGGTTCAGATGGATCAGAGGGAAGCAAAGTTCGTGTTACTGGGCCGTGGAGACAGAATGATCGAGAAAGTGAATCAGTTAATCAGAAGATTCTTTCTTCTGGCTTGAAGCAAGAAAGCCAGGGGGATGAAAGTAATCGCCCTAATAACAATGAGGTTTCAGGATCCTGGTCCTCCTTTAATGTTAACAGCACAAGCAGTGCCAGCAGCTGTGGGAGTGCTGGCAGTTGTGCTGTCAATAATAAAGTGGATGTGGACACTGATTGCTTGGATTATGAAATTTTGTGGGAGGACCTGACAATTGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTGTATCATGCTCTGTGGTATGGATCAGATGTTGCCGTTAAAGTTTTCTCAAAGCAAGAATATTCAGATGAATTGATACTGTCCTTCAGACAAGAGGTGTCTGTCATGAAAAGACTTCGACACCCAAATATTCTTCTCTTTATGGGGGCCGTGACTTCACCTCAACGTCTCTGCATCGTGACAGAGTTTCTCCCGCGTGGAAGCTTGTGCCGCTTGTTACACAGAAACACTTCTAAACTTGACTGGAGACGGAGAGTTCATATGGCCTTGGATATTGCACGGGGCGTAAATTATCTTCATCATTCTAACCCACCTATCATCCACAGAGATTTGAAGTCTTCAAATCTTCTAGTTGATAAGAACTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCACGAGTTAAGCATGAAACATATCTCACAACTAAGACTGGAAGGGGCACGCCTCAATGGATGGCACCCGAAGTTCTTCGTAATGAACCCTCCGATGAGAAATCTGACGTTTACAGCTTTGGAGTGATATTATGGGAAATTGCAACTGAAAAGATACCTTGGGATAATCTCAACTCAATGCAGGTGATTGGAGCTGTAGGATTCATGAATCAAAGGCTAGAAATTCCAAAAAATATCGATCCACGGTGGGCTTCTATAATTGAGAGCTGCTGGCACACCGATCCAACATGCCGGCCAACGTTCCCGGAACTGCTTGAACGGCTTAGAGAGCTGCAAAAACAGTATGCCATTCAGTTCCAGGCAACCCGATCCGCCAGCAAGGAAAGTACCCAAAAGGAGTCCTAG 2349 0.4687 MGTPPTDELVKKIQQLEEGHAHLKQEMSKLKLSDVRHGHRQRSHSVSPQRSRLGAPPRRRTDAPAAAWKRGSCSFKQSSPLQRESRGGGDPQIHGGSGGGGGGGEGEGATPRRGPSAVNFTERQYLNILQSMGQSVHILDLNCRIIYWNRSAENLYGYTAEEALGRDGIELLVDPRDLGLANDTVNRVMVGENWTGQFPVKNKMGEKFLAVATNTPFYDDDGSLVGIICVSCDSRPFLEMKVPMSGVRNTESDLDSGGTRSRSSITNKLGIDTQQPLQVAIASKISNLASKVSNKVRSRIWTGENNVDREGGSGESHNSEHSLLESVLSDQREDANSSGASTPRGDVPPFHFGVFSHGEEKSQGKSSRESGDESEGKSIHKSIPAKAEAWIQRKTLSWPWRTKDREGSDGSEGSKVRVTGPWRQNDRESESVNQKILSSGLKQESQGDESNRPNNNEVSGSWSSFNVNSTSSASSCGSAGSCAVNNKVDVDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDELILSFRQEVSVMKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLCRLLHRNTSKLDWRRRVHMALDIARGVNYLHHSNPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRVKHETYLTTKTGRGTPQWMAPEVLRNEPSDEKSDVYSFGVILWEIATEKIPWDNLNSMQVIGAVGFMNQRLEIPKNIDPRWASIIESCWHTDPTCRPTFPELLERLRELQKQYAIQFQATRSASKESTQKES 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02145 782 ProSiteProfiles Protein kinase domain profile. 504 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g02145 782 Pfam Protein tyrosine and serine/threonine kinase 504 756 IPR001245 GO:0004672|GO:0006468
Phco8g02145 782 MobiDBLite consensus disorder prediction 401 463 - -
Phco8g02145 782 Gene3D PAS domain 133 235 - -
Phco8g02145 782 MobiDBLite consensus disorder prediction 19 34 - -
Phco8g02145 782 SUPERFAMILY Protein kinase-like (PK-like) 493 756 IPR011009 -
Phco8g02145 782 CDD PAS 132 233 IPR000014 -
Phco8g02145 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Phco8g02145 782 NCBIfam PAS domain S-box protein 122 230 IPR000014 -
Phco8g02145 782 Pfam PAS fold 124 230 IPR013767 GO:0006355
Phco8g02145 782 MobiDBLite consensus disorder prediction 361 382 - -
Phco8g02145 782 CDD STKc_MAP3K-like 510 756 - -
Phco8g02145 782 FunFam PAS domain-containing protein tyrosine kinase family protein 582 774 - -
Phco8g02145 782 ProSiteProfiles PAS repeat profile. 121 192 IPR000014 -
Phco8g02145 782 SMART pas_2 123 190 IPR000014 -
Phco8g02145 782 Gene3D Phosphorylase Kinase; domain 1 497 581 - -
Phco8g02145 782 MobiDBLite consensus disorder prediction 303 388 - -
Phco8g02145 782 Coils Coil 6 33 - -
Phco8g02145 782 MobiDBLite consensus disorder prediction 431 463 - -
Phco8g02145 782 FunFam PAS domain-containing protein tyrosine kinase 497 581 - -
Phco8g02145 782 MobiDBLite consensus disorder prediction 317 343 - -
Phco8g02145 782 MobiDBLite consensus disorder prediction 19 116 - -
Phco8g02145 782 SUPERFAMILY PYP-like sensor domain (PAS domain) 127 230 IPR035965 -
Phco8g02145 782 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 198 762 - -
Phco8g02145 782 Gene3D Transferase(Phosphotransferase) domain 1 582 782 - -
Phco8g02145 782 SMART serkin_6 504 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g02145 782 MobiDBLite consensus disorder prediction 248 269 - -
Phco8g02145 782 PRINTS Tyrosine kinase catalytic domain signature 664 674 IPR001245 GO:0004672|GO:0006468
Phco8g02145 782 PRINTS Tyrosine kinase catalytic domain signature 683 705 IPR001245 GO:0004672|GO:0006468
Phco8g02145 782 PRINTS Tyrosine kinase catalytic domain signature 727 749 IPR001245 GO:0004672|GO:0006468
Phco8g02145 782 PRINTS Tyrosine kinase catalytic domain signature 578 591 IPR001245 GO:0004672|GO:0006468
Phco8g02145 782 PRINTS Tyrosine kinase catalytic domain signature 617 635 IPR001245 GO:0004672|GO:0006468
Phco8g02145 782 MobiDBLite consensus disorder prediction 249 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02145 Phco-Chr8 23004344 23010839 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phco8g02145 PK_Tyr_Ser-Thr 9.6e-69 CL0016