Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02066 ATGTGCCACCAGTTGCTGGAAGATATATATTGGCAGCTGCGAATGGCATCTGATCTAAGTTCGGGGCTGTCCAAGGAAACGTCTGTATTTGGGTTGAAAGCATGGGAACTAATGGGGATCCTGGTTGGGTTGTTCATTATAATCATTCTTGTGGTGGTATCAATATGTCTTACTTCACGAAAGAAATCCAGAAGAGTCAATGGCATGCTTCCCCTTAGCCATATGCTATCTGTTTCAGATGAAATCAAGGAAATTAGAGTTGATCAAGTTTCATCCAATAATCATCCTCAGAATGGAGCTTTTATGAGTCTGTATGACAGGTTTAGTGACAGGGACTCTGAAAAGGTTTTGATCCAACCAAATAATGGGGAAAATAGCAGTCAATCGGGCTCATTTGTTCATCTTAAGAAAGATGACGGTGGCTCTCAATCAGGTGAAGAAAGTGGTGCCAAGTCTGTTTCTACTTACAGGTCTTCTTCACATCCTATAACTGCACCATCTCCCTTGTCTGGTCTTCCTGAATTCTCTCACCTTGGATGGGGACACTGGTTCACATTAAGGGACCTAGAACTTGCAACAAACAGGTTTTCGAAAGACAATGTTATTGGTGAAGGTGGATATGGAGTTGTTTATCAAGGGCAGTTAATCAATGGGAGCCCTGTGGCTGTTAAGAAGCTACTCAATAATCTAGGACAAGCTGAAAAGGAATTTAGAGTGGAAGTTGAGGCTATTGGCCATGTGCGACACAAGAATTTGGTTAGACTTTTGGGCTATTGCATTGAAGGGACTCACAGGTTGTTGATTTATGAGTATGTTAACAATGGCAATTTAGAGCAATGGCTTCATGGAGCCATGCGACAGTATGGTTTTCTTACTTGGGATGCTCGAATTAAAATTCTTCTGGGAACAGCTAAAGCGCTATCTTACTTGCACGAGGCAATTGAGCCAAAAGTTGTACATCGAGATATTAAATCAAGCAATATTCTAATTGATGATGACTTCAATGCCAAAATATCTGACTTTGGGCTGGCAAAGTTACTTGGTGCTGGAAAAAGCCATATCACAACTCGCGTAATGGGTACTTTTGGATATGTGGCTCCAGAATATGCCAACTCTGGCTTACTAAATGAGAAGAGTGATGTTTATAGCTTTGGGGTGTTGCTCCTGGAAGCGATCACCGGAAGGGACCCAGTGGATTATAGCCGACCAGCAACTGAGGTAAATTTAGTTGACTGGCTCAAGATGATGGTTGGGAATAGGCGCGCAGAAGAGGTGGTAGACCCTAACATTGAGACCAGGCCTTCAACAAGTGCCCTTAAACGTGCCCTTTTGACTGCTTTGAGGTGTGTTGATCCAGATTCTGAGAAAAGACCAAAGATGAGTCAAGTTGTTCGCATGCTCGAATCAGAGGAATATCCCATACCCCGCGAGGATCGAAGACGCCGAAAGAGTCAAACAGGGAATATGGATGTGGAGGCCCAGAAGGACGTTTCTGATACAGAGAAGAGTGACACTCCAGATTCAAAGTCCAATGGCAGAAGGAACCAAAAGAAGTAG 1557 0.4329 MCHQLLEDIYWQLRMASDLSSGLSKETSVFGLKAWELMGILVGLFIIIILVVVSICLTSRKKSRRVNGMLPLSHMLSVSDEIKEIRVDQVSSNNHPQNGAFMSLYDRFSDRDSEKVLIQPNNGENSSQSGSFVHLKKDDGGSQSGEESGAKSVSTYRSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYQGQLINGSPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLIYEYVNNGNLEQWLHGAMRQYGFLTWDARIKILLGTAKALSYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPATEVNLVDWLKMMVGNRRAEEVVDPNIETRPSTSALKRALLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREDRRRRKSQTGNMDVEAQKDVSDTEKSDTPDSKSNGRRNQKK 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02066 518 FunFam Putative receptor-like protein kinase 178 271 - -
Phco8g02066 518 ProSiteProfiles Protein kinase domain profile. 196 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g02066 518 SMART serkin_6 196 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g02066 518 PANTHER OS01G0323000 PROTEIN 19 494 - -
Phco8g02066 518 ProSitePatterns Protein kinases ATP-binding region signature. 202 225 IPR017441 GO:0005524
Phco8g02066 518 MobiDBLite consensus disorder prediction 454 518 - -
Phco8g02066 518 MobiDBLite consensus disorder prediction 145 165 - -
Phco8g02066 518 Pfam Protein kinase domain 197 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g02066 518 CDD STKc_IRAK 202 468 - -
Phco8g02066 518 Gene3D Phosphorylase Kinase; domain 1 178 271 - -
Phco8g02066 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 318 330 IPR008271 GO:0004672|GO:0006468
Phco8g02066 518 Gene3D Transferase(Phosphotransferase) domain 1 272 484 - -
Phco8g02066 518 FunFam Putative receptor-like serine/threonine-protein kinase 272 483 - -
Phco8g02066 518 MobiDBLite consensus disorder prediction 118 165 - -
Phco8g02066 518 SUPERFAMILY Protein kinase-like (PK-like) 180 477 IPR011009 -
Phco8g02066 518 MobiDBLite consensus disorder prediction 118 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02066 Phco-Chr8 21998811 22002271 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Phco8g02066 Pkinase 1.2e-48 CL0016