Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02032 ATGGAGGACAAAGTTGCATTCAAAAACTTGCTGGAAGTTCAGAAAAAGACATGTGTTAGCAATACAGATGCACTGAACTGGACTCAGGAACCCTCCATTAGAACTACTCTAGGATCTACTCTTCTCGGTTTGAGGCTTAATAACTTTGAGCTTCCCCAAAATCTTGAGCAACAGCCACTGAACCAATTGGGCTTGTTGCAAATTGAGCTAGAGGAGCTGAAGAAGGAGAATCAAAATTTAAGGTCAATGCTTAGTGAGATCACTGAACACTACGCAGATCTTCAGAATCAGTTATTGTTGGCGATGCGGCCAAAGAAACTATCTTCATCACCTCCGAATGATGAGGACATGCAGAAGGATAGCAGGCACGATAACGTGAAGAAGTCAATTTTACCCTCTTGGCAGTTCTTATACACTGGTAAAATGAATAACCAAATAACACCACAAGAAGCAAAAATCATAGAAGATCAGGCCTTTGAGGCTTCTTGCAAGAAAGCTAGAGTGTCCATAAGAGCACGATCAGAATCTTTGAAGGGTGATGGGTGTCTATGGAGAAAATATGGACAAAAGATATCAAAGGGTAACCCTTGTCCTCGAGCCTACTACCGTTGCAACATGGGAACAGCATGTCCAGTTCGCAAGCAGGTTCAGAGGTGTGCTACTGATGAAAGTGTTGTGATCACAACCTATGAAGGGAATCATAATCATTCACTCCCTCAAGCAGCCAGATCCATGGCTTGCACAACATCAGCAGCACTGACCATGTTCCTTTCTGGCTCAACCACTAGTTCACATGCCACCACTTTTTCAAATCATGACCTCTTCTTCTCTTCACTGTCTGCTTCTACCCACTATCAATCTGCATCATCATGTCCAACTGTAACACTGGACTTAACCCAGCCCCCTAAGAACTACCTCAAATTTCCAACTGCAACTGCTCTTTCTTCAAACCATTCTCAAACTTTCCCTCTTTCATTGAATGGTTACCCTCAACAGTGTGAGGGATTACCCTCGGAGAAAGAGCTTCCCTTGGTGGATGTTCTTAGTGCTGCCATCACCAGGGATCCTTCTCTTAGGGCAGCATTAGAAGCAGCCGTTTCCTCTATGGTTGGAGATTCTCAGAACATCCATAACCATGGCCAACTTAGTAGGAGTCCTTATGACCCTTCTTCTAAGATGCCTGCTGAAGCTTCACAGATTTAG 1203 0.4389 MEDKVAFKNLLEVQKKTCVSNTDALNWTQEPSIRTTLGSTLLGLRLNNFELPQNLEQQPLNQLGLLQIELEELKKENQNLRSMLSEITEHYADLQNQLLLAMRPKKLSSSPPNDEDMQKDSRHDNVKKSILPSWQFLYTGKMNNQITPQEAKIIEDQAFEASCKKARVSIRARSESLKGDGCLWRKYGQKISKGNPCPRAYYRCNMGTACPVRKQVQRCATDESVVITTYEGNHNHSLPQAARSMACTTSAALTMFLSGSTTSSHATTFSNHDLFFSSLSASTHYQSASSCPTVTLDLTQPPKNYLKFPTATALSSNHSQTFPLSLNGYPQQCEGLPSEKELPLVDVLSAAITRDPSLRAALEAAVSSMVGDSQNIHNHGQLSRSPYDPSSKMPAEASQI 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02032 400 MobiDBLite consensus disorder prediction 372 400 - -
Phco8g02032 400 MobiDBLite consensus disorder prediction 109 124 - -
Phco8g02032 400 SUPERFAMILY WRKY DNA-binding domain 177 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco8g02032 400 MobiDBLite consensus disorder prediction 105 124 - -
Phco8g02032 400 SMART WRKY_cls 178 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco8g02032 400 Pfam WRKY DNA -binding domain 180 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco8g02032 400 Coils Coil 63 97 - -
Phco8g02032 400 Gene3D WRKY domain 163 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco8g02032 400 ProSiteProfiles WRKY domain profile. 173 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco8g02032 400 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 59 378 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02032 Phco-Chr8 21709770 21713696 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco8g02032 WRKY 6.2e-22 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02610 7 45038826 45042188 Phco8g02032 8 21709770 21713696 PCT