Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02016 ATGGCTGGTGTGAACCCCGTGGCAGGAGAAGGGCGGAAGCTTTATCCCACTTCTGCTATGGAGATTGCCCTTGATGGTGTTGATGGAAGGAGTGACAACATGGAGGTCCGCAACACCTTAACTGATGATGGCTCCCCGCATTTCTCTGTTACTAGGCCAGTGGCAGTGCCATCATCTGGACAGATTAAAGTGATTCCTAGTCCAACCTCGTTTAGCATCCTCTATAAGGGGAATATGTGTATTTATGAAGGAATTCCCGCAGAAAAGGTGCGTGAAATAATGTTGATTGCTTCTGTCTCTGCTAAGTCTGCTGAAATGAAGAGTGGGGTCCCTTGGACTTCACTCATTTCCAAAAGTCCTTCTTCTCTTCTGGGAAACTCTACTAATTGTGCAAAGAATAGTTCCATTCTAAGGCTGCAAGATGAATTTCCATTATCACGCAGAGAATCACTTCAAAGGTTTCTCGAGAAGAGAAGAAACAGGTTGGCTAACAAAGCCCCGTACGCCTCAACGAAAAACATGGCTCACAACATAGAGAACAACTTCTGCTCTGACATGTCACATTTTGGTTCCTTGAACCATGAGAAGAGCAATTTCAGCCCAGTGTTGTCGCCTCTTTAA 621 0.4525 MAGVNPVAGEGRKLYPTSAMEIALDGVDGRSDNMEVRNTLTDDGSPHFSVTRPVAVPSSGQIKVIPSPTSFSILYKGNMCIYEGIPAEKVREIMLIASVSAKSAEMKSGVPWTSLISKSPSSLLGNSTNCAKNSSILRLQDEFPLSRRESLQRFLEKRRNRLANKAPYASTKNMAHNIENNFCSDMSHFGSLNHEKSNFSPVLSPL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02016 206 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 65 173 IPR040390 -
Phco8g02016 206 Pfam Jas motif 144 168 IPR018467 -
Phco8g02016 206 SMART tify_2 64 99 IPR010399 -
Phco8g02016 206 ProSiteProfiles Tify domain profile. 64 99 IPR010399 -
Phco8g02016 206 Pfam tify domain 66 98 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02016 Phco-Chr8 21519327 21521928 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phco8g02016 tify 2.8e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02016 8 21519327 21521928 Phco7g02622 7 45145474 45148950 PCT