Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01965 ATGTCGATCTCGTCGGAGTATTCAGGATTTTCCGGCAACCAGACGGCGAATTCGCCGGCGGAGAAGTCCACGTTCTCTCAGACTTGCAGTCTATTGAGCCAATACCTCAAGGAAAAGGGTACCTTCGGAGACCTTACCCTCGGAATGACATGCACCGTCGAAGCAAACGCATCTCCTTCTGAAACATCGTGTCACCCTGCAACAACCATGGAGTTGTTTCCCACCATCTTGACACAACGGAACCCTTCTGCTACTGTGGATTTCCTCTCTCCCGCGACTGCATATCCTCACTACTCAGAGCTTCCAACTGTGGTTAATAATTCAAGTGGTTTCAAGCCTGTGGAGAAGGAGCCTAAAGCTGCTCAGATGACAATCTTTTATGCTGGACAAGTGGTAGTGTTTAATGATTTCCCCCCTGAAAAAATGGAGGAGATAATGTCACTGGCCAGGAAGGGAATGTCCCAAAGCCCAAACTACCATGCATATGCTCACACTAGAAACCAGCAAGGAAATCATGCTTCCTTTGTTTCTAATGTCCCCCCTCAACCATCCTCCATGCCAATTGTTCGTGATCTTCCAATTGCGAGGAAAGTTTCACTTCATCGGTTTTTCGAGAAGAGGAAACATAGAATTGCTGCCAATGCGCCATATCAAATGAACAATCCCAACTCTGCTCCAAATAAGCACGCCGCAGAATCCATGCCATGGCTTGGATTTGGTCTTCCATCAAAACAAATCTGA 741 0.471 MSISSEYSGFSGNQTANSPAEKSTFSQTCSLLSQYLKEKGTFGDLTLGMTCTVEANASPSETSCHPATTMELFPTILTQRNPSATVDFLSPATAYPHYSELPTVVNNSSGFKPVEKEPKAAQMTIFYAGQVVVFNDFPPEKMEEIMSLARKGMSQSPNYHAYAHTRNQQGNHASFVSNVPPQPSSMPIVRDLPIARKVSLHRFFEKRKHRIAANAPYQMNNPNSAPNKHAAESMPWLGFGLPSKQI 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01965 246 MobiDBLite consensus disorder prediction 1 21 - -
Phco8g01965 246 ProSiteProfiles Tify domain profile. 116 151 IPR010399 -
Phco8g01965 246 Pfam Jas motif 193 218 IPR018467 -
Phco8g01965 246 SMART tify_2 116 151 IPR010399 -
Phco8g01965 246 Pfam tify domain 117 149 IPR010399 -
Phco8g01965 246 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 18 230 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01965 Phco-Chr8 20873508 20875377 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phco8g01965 tify 7.6e-17 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01965 8 20873508 20875377 Phco8g01965 8 20873508 20875377 ECH
Phco8g01965 8 20873508 20875377 Phco7g02664 7 45597175 45599269 PCT