Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01951 ATGACAATCGCATGGGGATCGATCTTCTCTACTTGTTTCAAGAGTGATTCTGTCTCTCCTTCTCCCAAGCCCACCAAAGAGGTGGCTACAAAGGGCTCTTCTTCCAACAGGGTCTCCATAATGGACTTGAGTTTTCCTGGCTCAACGCTGTCGGAGGATCTCTCCGTTTCTTTAGTGGGGTCAAACCTCCATGTTTTTTCACTCGCCGAGCTCAAGATCATCACACAGAGTTTCTCTTCGAGTAACTTTCTAGGAGAAGGAGGTTTTGGACCTGTGCATAAGGGCTTCATTGATGACAAGCTTAGGCCTGGCCTCGAGGCTCAACCGGTGGCCGTCAAGCTCTTGGACTTGGACGGTTCTCAGGGCCACCGAGAGTGGTTGACTGAAGTTGTGTTTCTGGGACAACTAAGGCATCAACATCTGGTGAAGTTGATTGGATATTGCTGTGAAGAAGAACACAGGCTTCTGGTATATGAATATCTACCACGAGGAAGCTTAGAGAATCAACTATTTAGAAGATTTACGGCATCGTTAACATGGTCAACGAGAATGAAAATTGCAGCTGGAGCTGCAAAGGGTCTAGCCTTTCTACATGAAGCAAAAAAACCAGTCATCTATAGAGATTTCAAAGCTTCAAACATTTTGTTAGACTCTGATTATGATGCAAAGCTTTCTGATTTTGGCTTGGCAAAAGATGGTCCCGAAGGAGATGACACACACGTTTCAACTAGAGTGATGGGCACACAAGGGTACGCGGCCCCAGAATACATCATGACAGGACACTTGACAGCAATGAGTGATGTATACAGTTTTGGAGTTGTTCTCTTGGAGATTCTAACAGGAAGAAGATCAGTTGACAAAGGGCGCCCGCCAAGAGAACAAAATCTGGTGGAATGGGCCAGGCCTGTTTTGAATGATTCCCGGAAACTTAGCCGAATAATGGATCCAAGACTCGAGGGACAGTATTCTGAGGTAGGGGCAAGAAAAGCAGCTGCATTGGCTTACCAATGTCTCAGCCACAGGCCAAGAAATAGACCCTTGATGAGCACTGTTGTTAGTGTTCTTGAGCCTCTTAAGGACTTTGATGATGTTCCAATTGGACCCTTTGTTTACACTGTTCCCACTGATCACAATGAAATGGCCAAAGAGGTTGAAACACCCAAGGAGAGGAAGAGGGAAAATGGTCATCATCATCACAGGAATCATCATCACAATGGTCATAAACATCATGATCACGATGAGGCCAATAAAGATGCAAATGGTCACCACCACCACCGAAATCGTCGCCACAATGGGCATAGGCCTCATCCACTTAAATCACCCAAGACACCAATTTCATCATCGGAGTCACAGAACAATGAACACCGAAATGGTAGAAGAAGTGGGTCAAACTCACCTGACACCTCCATTGCATCAGAAACACAAGGAAGCATGGGTTAG 1440 0.4576 MTIAWGSIFSTCFKSDSVSPSPKPTKEVATKGSSSNRVSIMDLSFPGSTLSEDLSVSLVGSNLHVFSLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKLRPGLEAQPVAVKLLDLDGSQGHREWLTEVVFLGQLRHQHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRFTASLTWSTRMKIAAGAAKGLAFLHEAKKPVIYRDFKASNILLDSDYDAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTAMSDVYSFGVVLLEILTGRRSVDKGRPPREQNLVEWARPVLNDSRKLSRIMDPRLEGQYSEVGARKAAALAYQCLSHRPRNRPLMSTVVSVLEPLKDFDDVPIGPFVYTVPTDHNEMAKEVETPKERKRENGHHHHRNHHHNGHKHHDHDEANKDANGHHHHRNRRHNGHRPHPLKSPKTPISSSESQNNEHRNGRRSGSNSPDTSIASETQGSMG 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01951 479 MobiDBLite consensus disorder prediction 441 479 - -
Phco8g01951 479 Gene3D Transferase(Phosphotransferase) domain 1 161 364 - -
Phco8g01951 479 Gene3D Phosphorylase Kinase; domain 1 47 160 - -
Phco8g01951 479 Pfam Protein tyrosine and serine/threonine kinase 82 354 IPR001245 GO:0004672|GO:0006468
Phco8g01951 479 ProSiteProfiles Protein kinase domain profile. 78 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01951 479 MobiDBLite consensus disorder prediction 393 407 - -
Phco8g01951 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Phco8g01951 479 MobiDBLite consensus disorder prediction 377 479 - -
Phco8g01951 479 FunFam Probable serine/threonine-protein kinase PBL8 161 370 - -
Phco8g01951 479 PANTHER OS01G0588500 PROTEIN-RELATED 38 359 - -
Phco8g01951 479 MobiDBLite consensus disorder prediction 422 437 - -
Phco8g01951 479 FunFam Serine/threonine-protein kinase BIK1 47 160 - -
Phco8g01951 479 MobiDBLite consensus disorder prediction 378 392 - -
Phco8g01951 479 SUPERFAMILY Protein kinase-like (PK-like) 53 356 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01951 Phco-Chr8 20672091 20674127 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco8g01951 PK_Tyr_Ser-Thr 2.5e-45 CL0016