Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01945 ATGCCTTCTATTTCTTCCACAATTCACGTCCCACACTTCCACAATTCCAGTTCTTCCAAATGGCCAAGAATCGCGGTTTCTCTTCCCATGACTACGGATTCTGATTTCTTGATCCCCAAGAAGAAGAAAGAAGTTTCGGTGCAACTTTCGACTCTAAAGCCACCTGTCTCCCGACTGGAAACTGTGAGGTTCTGCAATTTCAACCTTGGGCGCTTCCAACCTTCGCCTCAAGAATTGGAACCCCATGACAGCTTTGAGTTTGGCGATTTCGTTGCACGAGAGGCCCTTCTTGACGAAGAGTATTGGATAGCAGCGTGGCTAAGGGCAGAAAATGAGTGGAAAGATCGAAGAGAACGCTATCACACTGACAAAGAATTTGCCCATTATAGAAAGAAGATCTATGCTAGAAAGGAGTTTGCTAAGATAAAGAAGCGGTGCAAGGAGCCACAACACGGCCAGAGTTCCACATGCATCATCACGGAGAAGAAACAGCAGAAGGATATAAAACGCATAGTATTAAGAAGTGTTGTAGGAACCCTTGATCTGAATATCCGATATTTGCTGCAAGGGGAGACCTTTCCTGGGGAACTGGTGGATGCTCCACGTTTCTGTAAAATCGACCGAACACCAACAAGCAGATATGGTTATATTGAAAACTTATGTGTTGCCAAATCATATCGCCGCAAGGCTATTGCAAGCAACATGTTGTCTTTTACTGTGGAATATGCAAAATCTAGAGGTGTGGAACGTCTTTATGTGCATGTGGACACAAACAATGACCCTGCAGTGGCATTGTACCAAAAGTTGGGGTTTGAGGTAGTTGAAAACCCCTTGTTGATAAAAAGTCCTTATGACTTGCTTCGCTTACAGATGTAA 876 0.4418 MPSISSTIHVPHFHNSSSSKWPRIAVSLPMTTDSDFLIPKKKKEVSVQLSTLKPPVSRLETVRFCNFNLGRFQPSPQELEPHDSFEFGDFVAREALLDEEYWIAAWLRAENEWKDRRERYHTDKEFAHYRKKIYARKEFAKIKKRCKEPQHGQSSTCIITEKKQQKDIKRIVLRSVVGTLDLNIRYLLQGETFPGELVDAPRFCKIDRTPTSRYGYIENLCVAKSYRRKAIASNMLSFTVEYAKSRGVERLYVHVDTNNDPAVALYQKLGFEVVENPLLIKSPYDLLRLQM 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01945 291 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 127 291 IPR000182 GO:0016747
Phco8g01945 291 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 29 276 - -
Phco8g01945 291 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 213 275 IPR016181 -
Phco8g01945 291 Pfam Acetyltransferase (GNAT) family 176 271 IPR000182 GO:0016747
Phco8g01945 291 CDD NAT_SF 208 254 - -
Phco8g01945 291 Gene3D - 91 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01945 Phco-Chr8 20612141 20613913 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco8g01945 Acetyltransf_1 4.4e-15 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01945 8 20612141 20613913 Phco8g01945 8 20612141 20613913 ECH
Phco8g01945 8 20612141 20613913 Phco7g02684 7 45801743 45804208 PCT