Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01912 ATGAAGAAAGGAAACTTGGGGCTTGGTCTCAAACTCTCAGTTCCTGTTTCTGATCAATCTAATTTTGCCAAGTTCCTGACTGAAAGTGGGACCTTTAAGGATGGGGATCTGCTTGTCAACCGGGATGGAGTTCGAATTGTTTCTCAGAGTGATGTCGAAGCTCCACCTCCAATCAAGCCTACAGACGACCAGTTAACTTTGGCAGATGTAGATGTTATCAAAGTTGTTGGAAAGGGAAATGGAGGGGTTGTCCAATTGGTACAACACAAATGGACTAGTCAGTTTTTTGCATTGAAGGTCATTCAAATGAATATTGAGGAGTCTATGCGAAAGCAGATTGCACAAGAGCTGAAAATTAATCAACAGGCACAGTGTCCTTATGTTGTTGTCTGCTATCAATCATTTTATGAAAACGGTGTCATATCAATCATCTTAGAGTACATGGATGGGGGTTCCTTAGCTGATCTACTGAGGAAAGTTAAAACAATTCCAGAGCCTTTTCTTGCTGCCATCTGTAAGCAGGTGCTGAAGGGTTTAGTTTACCTTCACCATGAAAAGCATATTATCCACAGAGACTTAAAACCCTCTAATTTGTTAATAAATCATACAGGAGAAGTAAAGATTACTGACTTTGGTGTGAGTGCAATTATGGAAAGTACATCTGGTCAAGCAAATACCTTCATTGGAACTTACAACTATATGTCTCCAGAGAGAATCAATGGAAACCTGCGAGGCTACAACTACAAAAGTGATATATGGAGTTTGGGGCTAATATTGCTTGAGTGTGCTTTGGGGCGATTTCCATATACACCAGAAGATCAAAGTGAAAGTTGGGAAAGCATTTTCGAGCTTATTGAAACCATTGTTGATAAACCTCCTCCTATTCCTCCATCTGAACAATTTTCTACAGAATTTTGCACATTTATCTCAGCATGTCTACAGAAAGACCCAAAGAATCGACTGTCAGCTCAGGAATTAATGGGACATCCTTTTGTCAGCTTGTATGATGACTCGGAGGTGAATCTTTCATCTTACTTCTCCAATGCTGGATCTCCTCTTGCTACCTTGTAA 1071 0.4015 MKKGNLGLGLKLSVPVSDQSNFAKFLTESGTFKDGDLLVNRDGVRIVSQSDVEAPPPIKPTDDQLTLADVDVIKVVGKGNGGVVQLVQHKWTSQFFALKVIQMNIEESMRKQIAQELKINQQAQCPYVVVCYQSFYENGVISIILEYMDGGSLADLLRKVKTIPEPFLAAICKQVLKGLVYLHHEKHIIHRDLKPSNLLINHTGEVKITDFGVSAIMESTSGQANTFIGTYNYMSPERINGNLRGYNYKSDIWSLGLILLECALGRFPYTPEDQSESWESIFELIETIVDKPPPIPPSEQFSTEFCTFISACLQKDPKNRLSAQELMGHPFVSLYDDSEVNLSSYFSNAGSPLATL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01912 356 FunFam Mitogen-activated protein kinase kinase 6 151 351 - -
Phco8g01912 356 SMART serkin_6 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01912 356 FunFam Mitogen-activated protein kinase kinase 6 40 149 - -
Phco8g01912 356 Gene3D Transferase(Phosphotransferase) domain 1 150 352 - -
Phco8g01912 356 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Phco8g01912 356 CDD PKc_MAPKK_plant_like 85 336 - -
Phco8g01912 356 Pfam Protein kinase domain 72 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01912 356 Gene3D Phosphorylase Kinase; domain 1 47 149 - -
Phco8g01912 356 ProSiteProfiles Protein kinase domain profile. 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01912 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Phco8g01912 356 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 17 349 - -
Phco8g01912 356 SUPERFAMILY Protein kinase-like (PK-like) 67 340 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01912 Phco-Chr8 20201381 20205645 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Phco8g01912 Pkinase 5.8e-70 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01912 8 20201381 20205645 Phco8g01912 8 20201381 20205645 ECH
Phco8g01912 8 20201381 20205645 Phco7g02710 7 46069143 46073630 PCT