Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01874 ATGACATTATTGACCAACACTTTTGAATCAGAATGCTTGCTTCTGTCCCCAAGAATGCCTCGGAGAATACTTCAAGTGACTGCAGAGGAACCTCCTTCATCCTCTGTGGCTTTGAAAACCTCCGCGTCACGCTACGCCCCTGGAGTGTTCTTCTTCCTTGGGGGGACTGTATTGCTCATCATATTGCTCATTCTTCTGTTTATATTTTGGAGGCGTACTAAGGGGCCAGCAAAGGTGACGGAGAACACAACTCTAACAGGGAAATATATTGAACCGTCTGAGGTGATGAAGATGATAGTCCCAAATATTCAACAAGGACAGATGGAGTTCATTAGTGGGAACCTTCGGACAATTAGCTACTTTGACTTCCGGACATTGAGGAGAGCCACTAAGAATTTCCATCCTCGAAATCTGCTTGGAAGTGGTGGATTTGGGCCTGTCTATCAGGGCAAGTTGGCAGATGGAAGGCTTGTTGCAGTAAAGACATTGTCTCTTGACAAGTCTCAACAAGGAGAAAAAGAATTTCTGGCAGAAGTGAGAATGATCACAAGCATCCAACACAAAAATCTGGTTCGCCTTATCGGATGCTGCACAGATGGGCCTCAAAAGATACTCGTGTACGAATATATGAAGAACAGAAGTTTGGACCTCATAATTTATGGAAAGAGTGATCAATTTCTTAATTGGAACACTAGATTCCAAATTATCCTTGGTGTAGCACGGGGATTGCAATACCTCCACGAGGATTCGCAGTTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGAGAAGTTTCAGCCTAGGATTGGAGACTTTGGGCTAGCTAGGTTCTTCCCTGAAGACCAAGCTTATCTTAGCACTCAGTTCGCAGGAACATTAGGTTATACAGCTCCTGAGTATGCCATTAGAGGAGAGTTGTCCGAAAAGGCAGACATCTATAGTTTCGGAGTTCTTGTGCTTGAAATCATCAGTTGCAGGAAAAACACAGACCTTACTTTACCATCAGAAATGCAGTATCTACCTGAATATGCATGGAAACTTTATGAGAAGTCAATGTTGATGGAAATAGTGGATCCAAAGCTGCGAGAACATGGCATGGAAGAAAAGGATGTTATGCAAGCATTTCACGTGGCCTTATCGTGCCTTCAGCCACACGCAGATTTGAGACCTGCGATGTCAGAAATAGTAGCATTGCTGACATTCAAAGTTGAAATGGTTACCGCGCCAATGAGACCAACCTTCTTTCACAGGAGGCGCGTAATGGATGATGAGAACCATTCTTGGGGAGCTATATCCTCAGAGGGTTCTACAACTGCAGTGACATCATCCTAG 1347 0.4388 MTLLTNTFESECLLLSPRMPRRILQVTAEEPPSSSVALKTSASRYAPGVFFFLGGTVLLIILLILLFIFWRRTKGPAKVTENTTLTGKYIEPSEVMKMIVPNIQQGQMEFISGNLRTISYFDFRTLRRATKNFHPRNLLGSGGFGPVYQGKLADGRLVAVKTLSLDKSQQGEKEFLAEVRMITSIQHKNLVRLIGCCTDGPQKILVYEYMKNRSLDLIIYGKSDQFLNWNTRFQIILGVARGLQYLHEDSQLRIVHRDIKASNILLDEKFQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYEKSMLMEIVDPKLREHGMEEKDVMQAFHVALSCLQPHADLRPAMSEIVALLTFKVEMVTAPMRPTFFHRRRVMDDENHSWGAISSEGSTTAVTSS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01874 448 ProSiteProfiles Protein kinase domain profile. 133 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01874 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Phco8g01874 448 FunFam Cysteine-rich receptor-like protein kinase 10 98 209 - -
Phco8g01874 448 Gene3D Phosphorylase Kinase; domain 1 103 209 - -
Phco8g01874 448 SMART serkin_6 133 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01874 448 CDD STKc_IRAK 139 405 - -
Phco8g01874 448 SUPERFAMILY Protein kinase-like (PK-like) 114 407 IPR011009 -
Phco8g01874 448 Pfam Protein tyrosine and serine/threonine kinase 137 403 IPR001245 GO:0004672|GO:0006468
Phco8g01874 448 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 210 414 - -
Phco8g01874 448 Gene3D Transferase(Phosphotransferase) domain 1 210 413 - -
Phco8g01874 448 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 43 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01874 Phco-Chr8 19783956 19786929 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco8g01874 PK_Tyr_Ser-Thr 2.1e-48 CL0016