Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01861 ATGGGGAACTGTCGGAGTCTTCAATCAGCTTCTAAACCTGATGATCATCCCAAGGCGAAGAACCATTTAGGGAGGACTCAGTTCTCTGCCGGTCTCAGCAACGCAAGACTTAAACAGAATGGCGATTCTACTTCTCGTGGGTGTAGAAGTGACTTTGGAGGAACCAGTAGTCTGTTTGGGCAAAGTAGTAGCAATAATCACACATCAGGAAATAACACTAGCACGTCATTTTGGGGCTCTGAGAATAGCCAGGCCTCTGGAGTCAGAGATGGAGAGGAGTTTCCTCATGGTGAGATCTTGAATGCTCCAAAATTGAGAGTATTTACTTTGGCAGAATTGAGGGCTGCTACCAAAAATTTCAGAGCTGACAGGGTGGTAGGAGAGGGGGGTTTTGGTGCAGTATACAAGGGTTTGATTAGAGGAGAGGGATTGACTATTGCCATCAAGAAATGGAATCCTGGAAGCTCGCAAGGAGTTGCGGAATGGCAGTCAGAGGTGAATTTGGTAGGGAGACTTTCTCATCCCAACCTTGTAAAGTTGTTGGGATTTCGGCGAGAGGATAGCGAGCTGTTCCTGGTGTATGAATTCATGCATCGTGGCACCTTGGATAACCACCTATTTGGAAGAGGTGCAAATGTTCAACCACTTTCTTGGGCTACAAGGCTAAAGGTTATGATTGGAGCAGCTAGGGGACTTAATTTCCTTCATTCCATGGAAAGGAAAATTGTACATAGAGATTTTAAACCCTCAAATATACTCCTTGACGAGACATTTGCGGCAAAGTTATCAGACTTTGGCTTAGCCAAATCTTTTTCTTCGATTGATCAGACTCACGTATCAACACGAGTTATGGGAACAGCAGGCTATGCTGCTCCTGAGTATATGGCAACAGGTCGTTTGAAAGTGAAAAGTGACGTGTATTCATTCGGAATTGTTTTGACGGAGGTGCTGACAGGGGTGCGCTTGCGGAAGCTAAAGTCCTTCACGGATTGGTTCAAATCAAATCTACTAAATAGAGCGAAAATAAGAAGCACTATGGATGCAAAGTTGGAAGGAAAGTATCCAACCAACTTAGCATTACAGGTAGCTCAACTAGCTCTCAAATGCATCCAAACAGACCCAAAATTGAGGCCATCCATAAAAGAAGTTCTTGAAAGATTGGAACAGATTGAAGCAGCTAATGAGAAACCTGTTGGTTACAATTATATCAGAAGACGGGTTAATCGTTCCAAGGTAGTTCAACAACACGATCAGCCAGATGGTGCTCAGTTGGTTGAGAATTGA 1284 0.44 MGNCRSLQSASKPDDHPKAKNHLGRTQFSAGLSNARLKQNGDSTSRGCRSDFGGTSSLFGQSSSNNHTSGNNTSTSFWGSENSQASGVRDGEEFPHGEILNAPKLRVFTLAELRAATKNFRADRVVGEGGFGAVYKGLIRGEGLTIAIKKWNPGSSQGVAEWQSEVNLVGRLSHPNLVKLLGFRREDSELFLVYEFMHRGTLDNHLFGRGANVQPLSWATRLKVMIGAARGLNFLHSMERKIVHRDFKPSNILLDETFAAKLSDFGLAKSFSSIDQTHVSTRVMGTAGYAAPEYMATGRLKVKSDVYSFGIVLTEVLTGVRLRKLKSFTDWFKSNLLNRAKIRSTMDAKLEGKYPTNLALQVAQLALKCIQTDPKLRPSIKEVLERLEQIEAANEKPVGYNYIRRRVNRSKVVQQHDQPDGAQLVEN 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01861 427 Gene3D Phosphorylase Kinase; domain 1 104 196 - -
Phco8g01861 427 CDD STKc_IRAK 126 390 - -
Phco8g01861 427 Gene3D Transferase(Phosphotransferase) domain 1 197 409 - -
Phco8g01861 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Phco8g01861 427 SUPERFAMILY Protein kinase-like (PK-like) 101 387 IPR011009 -
Phco8g01861 427 FunFam receptor-like protein kinase FERONIA 85 196 - -
Phco8g01861 427 PANTHER OS01G0588500 PROTEIN-RELATED 67 391 - -
Phco8g01861 427 MobiDBLite consensus disorder prediction 26 87 - -
Phco8g01861 427 ProSiteProfiles Protein kinase domain profile. 120 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01861 427 ProSitePatterns Protein kinases ATP-binding region signature. 126 150 IPR017441 GO:0005524
Phco8g01861 427 Pfam Protein kinase domain 121 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01861 427 MobiDBLite consensus disorder prediction 1 95 - -
Phco8g01861 427 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 197 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01861 Phco-Chr8 19679881 19681829 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco8g01861 Pkinase 2.5e-50 CL0016