Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01808 ATGAGGTATATTCGGAGCAACAGCTTCAAGAGGCTCTTCTCCTTTGGAAGACGAGGTTCAAGGGAACAAGTTCTGAGTCCTAAAGGTGGAGAAAGTCATGAGACTCTTCCGTATAAAGAAGAACCTTATGGAAGACCCTCTTGGAAGTGCTTCTCTTATGAAGACTTGTTTGATGCCACAAATGGCTTCAGCTCAGAAAACTTGGTTGGTAAAGGAGGGTATGCGGAGGTTTACAAGGGAACAATGAATGGGGGTGAGGAAATTGCTGTGAAGAGACTCACAAGAACTTCGAGGGATGAGAGAAAGGAAAAAGAGTTTTTGACAGAGATTGGTACAATTGGTCATGTGAACCATTCCAATGTGTTGCCTCTTCTGGGGTGTTGTATTGACAATGGCCTTTACCTTGTTTTTGAGCTATCTTCTAGAGGTTCTGTTGCATCTCTTCTTCATGATGAAAAGTTGCCCCCTTTAGATTGGAAAACGAGGCACAAGATAGCTATTGGAACTGCACGCGGCCTCCACTACTTGCATAAGGGCTGCAAGAGGAGGATAATCCACCGGGATATTAAGGCGTCAAACATTTTGTTAACAAAGGATTTTGAGCCACAGATATCTGATTTTGGACTAGCAAAATGGCTTCCATCTCAATGGACTCATCATTCCATTGCCCCAATAGAAGGGACATTTGGACATTTGGCCCCAGAGTACTACTTGCATGGAGTTGTGGATGAGAAGACAGATGTGTTTGCCTTTGGTGTATTCTTGCTAGAAGTAATCTCAGGCAGAAAACCAGTAGATGGGTCACACCAAAGCTTACACAGCTGGGCAAAACCAATTTTGAACAAGGGTGGGATTGAAGAGTTGGTAGATCCAAGGCTTGAAGGGGCTTATGATGTGACAGAGTTAAAAAGATTTGCCTTTGCTGCATCTCTTTGCATTCGGGCTTCTTCAACTTGGCGACCTACCATGACTGAGGTACTAGAGATAATGGAAGAGGGAGAAAAAGATAAAGAAAAGTGGAAAATGCCAGAGGAAGAGGAGGAGGAGGAGGAGGAGTTCTGGGGTTTTGAGGATCTGGAATATGAATATGATAGCTCTTTTTCAATGTCGTTACTTGACTCCATTGGAAGCACTACTTAG 1140 0.436 MRYIRSNSFKRLFSFGRRGSREQVLSPKGGESHETLPYKEEPYGRPSWKCFSYEDLFDATNGFSSENLVGKGGYAEVYKGTMNGGEEIAVKRLTRTSRDERKEKEFLTEIGTIGHVNHSNVLPLLGCCIDNGLYLVFELSSRGSVASLLHDEKLPPLDWKTRHKIAIGTARGLHYLHKGCKRRIIHRDIKASNILLTKDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVFLLEVISGRKPVDGSHQSLHSWAKPILNKGGIEELVDPRLEGAYDVTELKRFAFAASLCIRASSTWRPTMTEVLEIMEEGEKDKEKWKMPEEEEEEEEEFWGFEDLEYEYDSSFSMSLLDSIGSTT 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01808 379 PANTHER OS08G0249100 PROTEIN 41 360 IPR046958 -
Phco8g01808 379 ProSiteProfiles Protein kinase domain profile. 63 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01808 379 FunFam Putative receptor-like serine/threonine-protein kinase 31 139 - -
Phco8g01808 379 CDD STKc_IRAK 69 332 - -
Phco8g01808 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Phco8g01808 379 SUPERFAMILY Protein kinase-like (PK-like) 39 330 IPR011009 -
Phco8g01808 379 ProSitePatterns Protein kinases ATP-binding region signature. 69 91 IPR017441 GO:0005524
Phco8g01808 379 SMART serkin_6 63 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01808 379 Gene3D Phosphorylase Kinase; domain 1 37 139 - -
Phco8g01808 379 FunFam Putative receptor-like serine/threonine-protein kinase 141 355 - -
Phco8g01808 379 Gene3D Transferase(Phosphotransferase) domain 1 141 356 - -
Phco8g01808 379 Pfam Protein tyrosine and serine/threonine kinase 66 270 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01808 Phco-Chr8 18874236 18878179 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phco8g01808 PK_Tyr_Ser-Thr 1.2e-40 CL0016