Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01788 ATGCGAGGGCAAAGGTTCAAACTGGCTACATTTTGTGCCTCACTACTGTCACTAGCCCCTTCTCATTTTTTGCCGCTCAAATTCCTCTTACTCGCTTTGTTGGCGGCTTCAGTTGGGAGAGAACGACGAATTATGGATACTGATGAGGAGTGCTCAATTGTTCTTGAATTACCTGAAACGGATCCTTTCTTTGACAAAAAGAAGAAATTACTACGAAGTAAGGGTTTTAGTCCCAAAGAACGGATATACCTCAGGAGCTCTTCAAAACCTGGCTGGATGAGTGCTACTGTGGAGGTGTTACTTCAGATTGCACGGATCATACAATTAAATGAGGTGGAACTTTATTTTGCTGAAGATGATGTATGCATGTCAATGGAATTTTACAGTCTCAGGAATGAGTTGGAGGCTCTCAATTCAATTGTTTTGCTCATTGACATATCACTTTCTAGTTGTTCAGATCTCCATACAAATATCCTGCAAGGGTTACGCCAAACAATTCTTGATTTAATTTCTGATTTGGGGGACAAAAACAGTGTGAAGGTAGTAGTTGAAAAGGACCACAGTTGTAACCAAGAAGAACGCCTGATAGAATGGGGTGAAAGCAATGGTGTAAAGACAGAATTAAAAATAGCTTATATTGAAGGAGCTGGTCGAGGTGCAATAGCAAGGAAAGATCTAAAAGTTGGAGACATTGCTTTGGAAATTCCTGTGTCCATTATCATTTCTGAGGAGCTTATACAGGAAACTGAAATGTATGGTGTCTTAAAAGAAATTGACGGCATATCATCTGAGACAATATTGCTATTATGGAGTATGAAAGAAAAGTACAATAGTGATTCAAAATTCAAAATTTATTTTGACGCACTCCCAGAAAAATTTAATACAGGTTTGAGTTTCAGCATTCAAGCAATTACAGTGTTAGATGGAACCTTGCTGTTGGAAGAGATAATGCAAGCACGGCAGCACCTGCATGCTCAATATGATGAGTTGTTCCCTGCTCTATGCAATACTTTTCCTGATATATTTCCACCAGAGCTGTACACATGGGAGAAATTTTTATGGGCTTGTGAACTTTGGTACTCTAATAGCATGAAGATAAAGTATTCCGATGGAAAGCTAAAAACATGCTTGATCCCTATTGCTGGCTTTCTTAATCATTCACTGTGCCCACATGTTCTGCACTATGGCCAAGTGGATCCTGCAAAAAATTCACTGAAATTTCGTCTGTCAAGACCATGCAGATCTGGAGAAGAATGCTGCTTAAGCTACGGCAACTTCTCCAGCTCTCATCTAATTACCTTTTATGGTTTTTTACCACAAGGAGACAACCCGTATGATGTTATTCCGTTAGACATTGACGGCACCGACGTTGATTCTAATGAGGATATACCCAGGTCCAACTGGACGAGTCACATGGTGCGTGGTACCTGGCTCTCCAGGGATCACAAGATATTCTATTATGGTCTTCCCTCTCCATTATTGGACCATCTTCGGAGATGTCGAAGTCCCATGCTGCGAACGAAGACCTTTTTGCAAGAAAGCTTGGAAAATGAGCTCGAAGTTCTTGAAAATCTGAAAGATATCTTCGATGAGATGATGGGAAATATGGGCGAGATCGATCTTGATGACAGAGAAAACTGCTATTGGGATGAAAAATTGGCTATGGATTTTAAAAATACACAAAGACGAATTGCGCATTCTGTTTCAACCTCGTGCCTCGCTGGTATGGATATGTTAAAGAACGAACTATACAAGTGCATGGCTGAGGACATCCTAGGCTAA 1782 0.4046 MRGQRFKLATFCASLLSLAPSHFLPLKFLLLALLAASVGRERRIMDTDEECSIVLELPETDPFFDKKKKLLRSKGFSPKERIYLRSSSKPGWMSATVEVLLQIARIIQLNEVELYFAEDDVCMSMEFYSLRNELEALNSIVLLIDISLSSCSDLHTNILQGLRQTILDLISDLGDKNSVKVVVEKDHSCNQEERLIEWGESNGVKTELKIAYIEGAGRGAIARKDLKVGDIALEIPVSIIISEELIQETEMYGVLKEIDGISSETILLLWSMKEKYNSDSKFKIYFDALPEKFNTGLSFSIQAITVLDGTLLLEEIMQARQHLHAQYDELFPALCNTFPDIFPPELYTWEKFLWACELWYSNSMKIKYSDGKLKTCLIPIAGFLNHSLCPHVLHYGQVDPAKNSLKFRLSRPCRSGEECCLSYGNFSSSHLITFYGFLPQGDNPYDVIPLDIDGTDVDSNEDIPRSNWTSHMVRGTWLSRDHKIFYYGLPSPLLDHLRRCRSPMLRTKTFLQESLENELEVLENLKDIFDEMMGNMGEIDLDDRENCYWDEKLAMDFKNTQRRIAHSVSTSCLAGMDMLKNELYKCMAEDILG 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01788 593 FunFam SET domain-containing protein 48 186 - -
Phco8g01788 593 SUPERFAMILY SET domain 193 445 IPR046341 -
Phco8g01788 593 CDD SET_LSMT 208 438 - -
Phco8g01788 593 ProSiteProfiles SET domain profile. 206 424 IPR001214 GO:0005515
Phco8g01788 593 FunFam Transcription factor, E2F and DP-related 190 438 - -
Phco8g01788 593 Gene3D - 46 159 IPR036464 -
Phco8g01788 593 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 178 533 - -
Phco8g01788 593 Coils Coil 512 532 - -
Phco8g01788 593 Gene3D set domain protein methyltransferase, domain 1 189 438 - -
Phco8g01788 593 Pfam SET domain 217 424 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phco8g01788 SET 2e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01788 8 18613984 18621099 Phco8g01788 8 18613984 18621099 ECH