Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01768 ATGTGTAATAAAGGGTTTCAATGCTTGAACGAGTGTGAGAGTGAAATTGATCATAGTCTAGAATTCTTCGTAATGGATAGTCCAATTCGATCGCCAGCTGCCGGCGAAGATAGCCGGCGTGTTAAGTTCTTGTGCAGCTTTCTGGGGGGCATAATGCCCCGTCCCCAAGATGGGAAGCTGCGGTATGTCGGTGGCGAGACACGAATTGTGAGTGTTTATCGAGAGATTAGCTATGAGGAGTTGATGGGGAAGATGAGAGAGTTGTATGATGGGGCTGCTGTATTGAAGTACCAGCAGCCTGATGAGGATCTTGATGCTCTTGTTTCTGTTGTCAATGATGATGATGTGGTTAACATGATGGAGGAGTATGACAAGTTGGGCTCAGGGGATGGATTCACCAGGCTCAGGATATTTTTGTTTTCACAATCCGAGCAGGATGGTTCCTCACATTTCATTGATGGGGATGATTCTGAGAGGAGGTATGTTGATGCATTGAATAGTTTAAATGATGTTGCTGACTTTAGGAGGTTGCAACAAGGAGAGTTTCCTATGATTAGCCCTGTTGAGGATATCCATGTGGCTGCTGATCAATTTTTTAATCCAATGAGTGTGGAAAGTGGGATTCATAGTCACAGAAGTGGGGACCTATCTATGTCACCGTATAATATGCATCATCTCTCGATCCAGCACCCGCAAACCATGGGCCCAAGGTATACTGAAATGGATTCTCCTTGGAATCCTGCTTATTACTCTCCTAGGCACCATGGTCTCCATGACTCCAGATCATTGGTTGAATTTCCATCTTCACCGTCTAGTAGATACCGAATGCCATTTCCAGAGTTACCAGACAAGTGCATTGATAGAGGGCCAGAGGAGTATGCTCGACATCATGTAAATCACCATCCTATGTATGATAATCAACCGCAGTATGCTGATAATGTTTTGTGGATGCCGACTGGAGCAGCTCATTGTGAAAAGGCAGGTTTTCCAGGCAATATTATTCATGGTTCTCATGTTGTTGATGGGAACAGCATATGTGAGCAGTGTCGCATGGGTTTTCATAGAGGTCAACCACATCCGGAGCATTCTAACGTAAGTAATGGACTTCCACCGGTAGCTAATCCGTGCGGAGAATGCCCCCTGCCAAATAGGGATGCTTTCCCCATAGTTGATGCAAAGTTACATCCCGCAATGTATCCTAAAGAACCTAATAATGATCATAGGCCTGTTTATAATGATACTCAGAATCATGAGAGAGGGTGGGGTTTGCAGCATCCAACAACTGCTCGGGTTGAGGAATCAAGAGGACATGTCTCTGTATCTGGAAGAGCGAGTGATGTTCCAGTAAATTTCTCTCTTGGGCATGGTAGTGTGACTGATGGACATACCCTGTCATCCAATTATCTTCATCAGCCGGTTGGACCTGAATTGGGGCCCGAAAATTTCCCTGACCAAACCATGACTGCATTACCACACGTACAAATTCCTCCACCAGAAGAATGCAATGTGCGGTATGGAAATCCACCTTCTTCTTATGGAGTAGATGGTAATTATGCTGTGCCCGGTGGGCATCCACCTGGTTTCTGGAGAAATACTCCAATTCCAGTTCATATGGGACCATCTTATGAGGCAACTACCTCACCTCCGCAGGTGAATGGTATGATAAATGCGGCATTAATCAGGGGAGAAGGCAGTCCAGGGTTTTATATTGGACCAGATAGTCAAAATCAATGGGTTGATTCCTCACAGAAATTGACAGGACATGATGGTACATCCATCCCAGAATATTCGCATGCACATGCTCTGATGTTGAATCCAACACCCCTTGGTCCAGAAAATCAGCACCCAATTACTGTAGATACCATTCACTCTTCACAGGACATGAGTACTGGTACCTGCTCGGAACCTTTGCAGCTTCCAAAATCATCTTTTAATATCGTTCATAATCAGGAGGCTTTAAGAAATGATACCCATTTGGCTTTAGCAAATAGTTTTGAATCAAATAGTTTGCTTGGAGAAGGAATAGAGGTAAAAATTGAGGACAAGGTTGAAAACCCTGATATGCAGACTATATCTTATTCAGAGCAAAATAAAGTTGCTGAGAATGCATCTCAAGCTGCTGCTTCTGTTGATTCTAATAATTCAAAGTCAAAACCTGAAGGAGACTGCAGGCATGTTGAGAAACTGGCTGATAAGGACCATTCTGTTCCAGAAGATACTAAGCATATAGTTAATCAATTCAGCTTCTTGCCTGAGTTGATTGCTTCCGTGAAAAAGGCTGCATTAGAAGTTGCTGAAGAGGTGAAAGCTGCAGCTGATGATGACCCAGCCAATTCTCATAATCAAAACTTAGACGTCAAGGAAAAAGCAATAAATGAAGGAGAGCCAGCGAATGCTCATGGTGATTTAGAATTGGACTCTGAAAATGACCACGTAGATACTTCTAAAATTGAGCCTACGAAGGCTGAGGAAGAAGCAATTGCCAGGGGATTGCAGACTATTAAAAATGATGATCTGGAGGAGATCCGTGAGCTTGGTTCTGGAACCTATGGAGCTGTTTATCATGGGAAATGGAAAGGTTCTGACGTTGCCATTAAGAGAATAAAAGCCAGTTGTTTTGCTGGAAGGCCATCTGAAAGAGCAAGATTGATTACAGATTTCTGGAAGGAGGCATTGATGTTGAGTTCATTGCATCATCCAAATGTTGTCTCCTTTTATGGCATTGTTCGTGATGGCCCTGACAGTTCTTTAGCAACAGTCACAGAATTCATGATTAATGGATCTTTGAAACAGTTCTTGCATAAGAAAGATAGAACAATTGATCGTCGTAAGAGACTCATTATAGCCATGGATGCTGCATTTGGAATGGAGTATTTGCATGGAAAAAACATTGTGCATTTTGATTTGAAATGTGAGAATCTATTGGTCAATATGAGAGATCCTCAACGCCCTGTCTGCAAGATTGGTGATTTGGGTTTATCAAAGGTTAAACAGCACACTCTAGTGTCGGGTGGAGTGCGTGGGACTTTGCCATGGATGGCACCTGAACTTCTTAGTGGGAAAAGCAATATGGTGTCAGAGAAGATTGACGTCTACTCATTTGGAATAGTTATGTGGGAGTTGCTCACAGGGGATGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGGAGGTATTGTGAACAACAGTTTACGTCCTCAAATCCCAACATGGTGTGATCCTGAGTGGAAGTCTCTAATGGAAAGTTGTTGGGCTTCTGATCCTGTAGAAAGACCATCATTTTCAGAAATTTCCAAGAAGCTGAGGAGTATGGCTGCTTCAATGAATGTGAAATAG 3339 0.431 MCNKGFQCLNECESEIDHSLEFFVMDSPIRSPAAGEDSRRVKFLCSFLGGIMPRPQDGKLRYVGGETRIVSVYREISYEELMGKMRELYDGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQSEQDGSSHFIDGDDSERRYVDALNSLNDVADFRRLQQGEFPMISPVEDIHVAADQFFNPMSVESGIHSHRSGDLSMSPYNMHHLSIQHPQTMGPRYTEMDSPWNPAYYSPRHHGLHDSRSLVEFPSSPSSRYRMPFPELPDKCIDRGPEEYARHHVNHHPMYDNQPQYADNVLWMPTGAAHCEKAGFPGNIIHGSHVVDGNSICEQCRMGFHRGQPHPEHSNVSNGLPPVANPCGECPLPNRDAFPIVDAKLHPAMYPKEPNNDHRPVYNDTQNHERGWGLQHPTTARVEESRGHVSVSGRASDVPVNFSLGHGSVTDGHTLSSNYLHQPVGPELGPENFPDQTMTALPHVQIPPPEECNVRYGNPPSSYGVDGNYAVPGGHPPGFWRNTPIPVHMGPSYEATTSPPQVNGMINAALIRGEGSPGFYIGPDSQNQWVDSSQKLTGHDGTSIPEYSHAHALMLNPTPLGPENQHPITVDTIHSSQDMSTGTCSEPLQLPKSSFNIVHNQEALRNDTHLALANSFESNSLLGEGIEVKIEDKVENPDMQTISYSEQNKVAENASQAAASVDSNNSKSKPEGDCRHVEKLADKDHSVPEDTKHIVNQFSFLPELIASVKKAALEVAEEVKAAADDDPANSHNQNLDVKEKAINEGEPANAHGDLELDSENDHVDTSKIEPTKAEEEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERARLITDFWKEALMLSSLHHPNVVSFYGIVRDGPDSSLATVTEFMINGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNSLRPQIPTWCDPEWKSLMESCWASDPVERPSFSEISKKLRSMAASMNVK 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01768 1112 PRINTS Tyrosine kinase catalytic domain signature 1029 1051 IPR001245 GO:0004672|GO:0006468
Phco8g01768 1112 PRINTS Tyrosine kinase catalytic domain signature 958 976 IPR001245 GO:0004672|GO:0006468
Phco8g01768 1112 PRINTS Tyrosine kinase catalytic domain signature 1073 1095 IPR001245 GO:0004672|GO:0006468
Phco8g01768 1112 PRINTS Tyrosine kinase catalytic domain signature 921 934 IPR001245 GO:0004672|GO:0006468
Phco8g01768 1112 SMART serkin_6 839 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01768 1112 SUPERFAMILY Protein kinase-like (PK-like) 831 1100 IPR011009 -
Phco8g01768 1112 PANTHER SERINE-THREONINE PROTEIN KINASE 107 1105 - -
Phco8g01768 1112 ProSitePatterns Protein kinases ATP-binding region signature. 845 866 IPR017441 GO:0005524
Phco8g01768 1112 MobiDBLite consensus disorder prediction 796 824 - -
Phco8g01768 1112 MobiDBLite consensus disorder prediction 702 716 - -
Phco8g01768 1112 SUPERFAMILY CAD & PB1 domains 57 147 - -
Phco8g01768 1112 CDD PB1_UP2 44 140 - -
Phco8g01768 1112 Gene3D Transferase(Phosphotransferase) domain 1 925 1112 - -
Phco8g01768 1112 SMART PB1_new 55 140 IPR000270 GO:0005515
Phco8g01768 1112 Gene3D Phosphorylase Kinase; domain 1 825 924 - -
Phco8g01768 1112 ProSiteProfiles Protein kinase domain profile. 839 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01768 1112 MobiDBLite consensus disorder prediction 702 723 - -
Phco8g01768 1112 CDD STKc_MAP3K-like 845 1102 - -
Phco8g01768 1112 ProSitePatterns Serine/Threonine protein kinases active-site signature. 964 976 IPR008271 GO:0004672|GO:0006468
Phco8g01768 1112 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 927 1112 - -
Phco8g01768 1112 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 832 926 - -
Phco8g01768 1112 Pfam PB1 domain 56 141 IPR000270 GO:0005515
Phco8g01768 1112 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 60 142 - -
Phco8g01768 1112 Gene3D - 59 143 - -
Phco8g01768 1112 Pfam Protein tyrosine and serine/threonine kinase 840 1102 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01768 Phco-Chr8 18378973 18384298 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Phco8g01768 PK_Tyr_Ser-Thr 1.8e-61 CL0016