Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01762 ATGGGGTTTGAGAACAAAATTGGGAAGTATCAGCTTGGAAGGACAATTGGAGAAGGTAGTTTCTCTAAGGTTAAGCTAGCTGTCAATGGCAGCAATGGTCAGAAGGTTGCGGTCAAGGTCATTGATAAGCATATGATCCTAGAAAACAATCTTAAGAATCAGGTTAAAAGAGAGATCAGAACAATGAAACTTCTGCATCATCCCAATATAGTTAGAATTCACGAGGTTGTTGCCACAAAAACGAAGATATACATCGTGATGGAATATGTATCAGGAGGACAACTACTAGACAAGTTGTCCTATGGAGAGAAGTTGAATGAACGTGAGGCAAGAAAACTATTCCAGCAACTCATTGATGCCCTGGACTACTGCCATAACAAAGGGGTGTATCATCGAGATCTCAAGCCAGAAAACCTGCTTCTTGACAGCAAGGGAAATCTCAAAGTGTCTGATTTTGGATTAAGTGCACTACAAAAGTGTAATGATGTCTTGACCACGCGGTGTGGATCTCCATGTTATGTAGCACCTGAGCTTCTACTGAGCAAGGGGTATAATGGAGCAGCTGCTGATGTTTGGTCATGTGGGGTGATCCTTTTTGAATTACTTGCAGGCTATTTACCATTTAACGACCAGAACTTGATGAACTTATATGCTAAGATATGGAATTCAGAATATAAATGTCCCCCATGGTTTACTCGGAGTCAAAGGAAACTAATTGCCAAAATACTAGAACCACGAGCTGCAAAGCGGATAACTATATCAGATATTATTGAAGATCCGTGGTTTCAAAAAGATTACAAGCCTGTTTTTGCATCTGAATTTGATCAGAACATTAACTTGGAGGGTGTTGATGTTGCTTTCAATTCAATTGAGGAAAATGTCAGAGAGACAACGATATCTAAGTCCTCAAGTTTCATTAATGCTTTTCAACTAATAGCCATGTCTCGGGACCTTGATCTATCTGGTCTTTTTGTAGAACAGGATGATAAAAAGCAGACAAGAAGACTGGGATCCAAACACACTATCAATGAAACGATAGAAAAAATAGAAGCAGCTGCAACAAATTTAAGACTGTCCGTAGAGAAAATTAGCAACTTCAAGATCAAAATGCAACCGAAACAGATAATGACCATGACCAGGTGTTCCAAATCATACTTATCAGCCAAGGTGATTGAAGTTGCTCCAGCTCATTGTGTTGTAGAAATATCAAAATCTACTGGAGATCTAAGAATGTACAACAAATTTTGTGAAAGTTTATCAAATCTGCTGAAGCAAAAACCCGATGTGCCATCACAAAGCCAAGATTCTGTAGATCAATGTGCCGCTGACAGAAAAAAAGACGACGCTGGATGCTATGCAGAGCCAAAAAGTGAATATGGCAAACTTTTTCGTGGCTACAACTCTTCTTGA 1410 0.3929 MGFENKIGKYQLGRTIGEGSFSKVKLAVNGSNGQKVAVKVIDKHMILENNLKNQVKREIRTMKLLHHPNIVRIHEVVATKTKIYIVMEYVSGGQLLDKLSYGEKLNEREARKLFQQLIDALDYCHNKGVYHRDLKPENLLLDSKGNLKVSDFGLSALQKCNDVLTTRCGSPCYVAPELLLSKGYNGAAADVWSCGVILFELLAGYLPFNDQNLMNLYAKIWNSEYKCPPWFTRSQRKLIAKILEPRAAKRITISDIIEDPWFQKDYKPVFASEFDQNINLEGVDVAFNSIEENVRETTISKSSSFINAFQLIAMSRDLDLSGLFVEQDDKKQTRRLGSKHTINETIEKIEAAATNLRLSVEKISNFKIKMQPKQIMTMTRCSKSYLSAKVIEVAPAHCVVEISKSTGDLRMYNKFCESLSNLLKQKPDVPSQSQDSVDQCAADRKKDDAGCYAEPKSEYGKLFRGYNSS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01762 469 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Phco8g01762 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Phco8g01762 469 FunFam Non-specific serine/threonine protein kinase 301 426 - -
Phco8g01762 469 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01762 469 CDD CIPK_C 307 425 - -
Phco8g01762 469 FunFam Non-specific serine/threonine protein kinase 2 89 - -
Phco8g01762 469 Gene3D Kinase associated domain 1, KA1 302 426 - -
Phco8g01762 469 Gene3D Transferase(Phosphotransferase) domain 1 90 285 - -
Phco8g01762 469 FunFam Non-specific serine/threonine protein kinase 3 303 - -
Phco8g01762 469 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01762 469 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 418 - -
Phco8g01762 469 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Phco8g01762 469 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Phco8g01762 469 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01762 469 Pfam NAF domain 304 362 IPR004041 GO:0007165
Phco8g01762 469 SUPERFAMILY Protein kinase-like (PK-like) 7 272 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01762 Phco-Chr8 18323323 18327052 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phco8g01762 Pkinase 4.5e-73 CL0016