Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01755 ATGGTACTGCCCTCCCCTGCCAAAATACTCATTGGCCTCTCCTTAGACCCAGATGACAGCAAGGAGCTTCTCTCATGGGCAATAAGAGTTCTAGCCAATCCAAATGACACCATTGTGGCTGTGCATGTGCTTGTTACTGCGGATAAGAAGAAGCGAGTCTCCGTCAGAAAGAGGCAATCACAACTTAGACAAGCAAAGGCATATGTTATATCTGTGCTTGGAGAATTTGCACAGACCTGTTGGTCTAAGCAGGTTAATTTGGAGGCAAGGGTGGCACTCAATTCCACAGTTGGTGAAGGTTTATCGGAGGAAACCAAGTCCATCAATGCTGACTTTCTTCTTATTCGTGGCTCAAGAAACCAAACTAATAAAATTGGAACTTCCAAAGGAATTACAGGTTATTGCTTTGAGCATGCGCACGAAGGGTGCACAATAGTCTCAGTTGGAAGACGTAGGAAGGCAGATCAAAGTGTCAAGCCAAACTCAGCTCATTTTCAAGTAGATAACAAACAACCAAATTCAAGAAGGTTTAAGAAGGAAAAGCAATGTGATAAGGGTGTCTCCCCTGTTCTGGAGGATTATATCTCAGGAATCAAGGCTCAGAGCCGTTCACCAAGAACAGTCCTAAATGGTCTAGAGGGACAATCAAACAGCACAGAAGATGATACCTTTAGCACTAGGGTCTCAAGCACCACGTATACCCCATCATTGGATTCTAAGATTAAGAGCCGATCCAAGATAAAACCACAGTTCTCATTTAGGTTCATAGTCTCATTCCTTGCTTCACCATTTAGAAGGAAAAACTTTAACATTTACGAAAGTGAAAAGCGTCAACCTTTGTTGAAGTGCTTCAGCTATGAACAGATATTCAATGCTACCAACGACTTCCACCAAGATAATTTGGTTGGACGAGGTGGGTATTCGGAAGTATACAAAGGTGATCTTTCAGATGGACGAACCATTGCTGTGAAGAGGTTGGCCAAGGACAACAAGGATCCTAACAAGGAAAAAGAGTTCCTTATGGAATTGGGTGTTATTGGACATGTCTGTCATCCTAATACTGCAACTTTAGTCGGCTGCTGCATTGAAAATGGGCTATATCTGATTTTCAATTACTCTCAAAATGGAAACTTGGCAACTGCATTGCATGGTAAAGGAGGCGATTCACTAGACTGGCCAATCAGGTACAAAATTGCCATTGGTGTTGCAAGGGGTCTCCATTATCTTCACAAATGTTGCAAACACCGAATAATTCACCGTGACATTAAAGCCTCTAATGTTCTTCTTGGTCCTGACTATGAACCACAGATTGCTGATTTTGGGCTTGCAAAGTGGCTTCCTAACAAGTGGACTCACCATGCTGTGATCCCCGTGGAGGGCACGTTTGGATACTTAGCGCCAGAATACTTTATGCATGGAATCGTGGATGAGAAAACAGATGTTTTTGCATTTGGAATTCTACTTTTGGAGATTGTAACTGGACGGAGACCGGTTGATTCATCAAAACAAAACCTTCTCTTATGGGCAAAGCCTCTAATGGAATCAGGGAATATTGCTGAGCTGGCAGATCCAAGAATGGAAGGTAAATATGATGGACAGCAACTGTACAGGGTAGTGCTAGCGGCTTCATACTGTGTGAGACAAACTGCCACATGGCGTCCCCCAATGAGCGAGGTGTTAGAGCTGCTAACCAGTGGCGAAGACAGTGAGGTTGGAAAAAGCTGGAGGATCCCAAAGTTCACCTCTGATGAATTGGATGATTACTCTATGGTTTTCGGATATGATGTACCCTCAGACCTATCTTTGGAGGATTATTTGTGA 1821 0.4333 MVLPSPAKILIGLSLDPDDSKELLSWAIRVLANPNDTIVAVHVLVTADKKKRVSVRKRQSQLRQAKAYVISVLGEFAQTCWSKQVNLEARVALNSTVGEGLSEETKSINADFLLIRGSRNQTNKIGTSKGITGYCFEHAHEGCTIVSVGRRRKADQSVKPNSAHFQVDNKQPNSRRFKKEKQCDKGVSPVLEDYISGIKAQSRSPRTVLNGLEGQSNSTEDDTFSTRVSSTTYTPSLDSKIKSRSKIKPQFSFRFIVSFLASPFRRKNFNIYESEKRQPLLKCFSYEQIFNATNDFHQDNLVGRGGYSEVYKGDLSDGRTIAVKRLAKDNKDPNKEKEFLMELGVIGHVCHPNTATLVGCCIENGLYLIFNYSQNGNLATALHGKGGDSLDWPIRYKIAIGVARGLHYLHKCCKHRIIHRDIKASNVLLGPDYEPQIADFGLAKWLPNKWTHHAVIPVEGTFGYLAPEYFMHGIVDEKTDVFAFGILLLEIVTGRRPVDSSKQNLLLWAKPLMESGNIAELADPRMEGKYDGQQLYRVVLAASYCVRQTATWRPPMSEVLELLTSGEDSEVGKSWRIPKFTSDELDDYSMVFGYDVPSDLSLEDYL 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01755 606 Gene3D Transferase(Phosphotransferase) domain 1 374 576 - -
Phco8g01755 606 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 116 - -
Phco8g01755 606 Gene3D Phosphorylase Kinase; domain 1 260 372 - -
Phco8g01755 606 Pfam Universal stress protein family 8 139 IPR006016 -
Phco8g01755 606 MobiDBLite consensus disorder prediction 155 182 - -
Phco8g01755 606 SMART serkin_6 296 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01755 606 Gene3D HUPs 4 148 IPR014729 -
Phco8g01755 606 MobiDBLite consensus disorder prediction 208 229 - -
Phco8g01755 606 PANTHER OS08G0249100 PROTEIN 57 576 IPR046958 -
Phco8g01755 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Phco8g01755 606 FunFam Putative receptor-like serine/threonine-protein kinase 263 372 - -
Phco8g01755 606 CDD USP_Like 8 119 - -
Phco8g01755 606 FunFam Probable receptor-like serine/threonine-protein kinase At5g57670 373 577 - -
Phco8g01755 606 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Phco8g01755 606 Pfam Protein kinase domain 296 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01755 606 ProSiteProfiles Protein kinase domain profile. 296 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01755 606 SUPERFAMILY Protein kinase-like (PK-like) 270 563 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01755 Phco-Chr8 18209387 18212383 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phco8g01755 Pkinase 2.7e-40 CL0016