Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01742 ATGAAAGTGCTTCTGAGATGGAAAAAACCAATAACCCTCCTAAGTTCTGAGGAAGCCAAAGGTTTAGCTTCATATTTCATCAAGTGTGTGGAGCAAGATTTTGTATTTGATATTATTCATGAAAGAGTGATGAAGGAAGGGGAGAAAAATCATATCATGGAAGTTGTCAATCTTGCAAATAGATGTTTCGAGTTGAATGGAAAGACACGACCAACTACAAAGGAAGTCACATTAGAATTAGAAAATGGTGAGGCTTTTGAGTTCATGAAGCTTAAAGGAGTTGGAGAAGGCACCCATAACTTCAACATGAAAAGAGTAATTGGAAAAGTAGGTCAAGCTACTATTTACAAAGTTGCTAGAGCTTTGTTTTACTTGCACTCTGCTGCTTCTCAGCCTATTTATCATAAAGATATCAAGTCAATAAATATACTTTTGGATGAAAAGTATAGAGCAAAAGTTGCAAACTTTGGTACATTTAGAATGATTTCCAGTGATGTTACTCACCTTACTACAGTAGTTCAAGGGAAAAAGCCAATAACCCTCCTAAGTTTAGAGGAAGCCAAAGGTTTAACTTCATATTTCATCAAGTGTGTGCAGCAAGATTTTGTATTTGATATTATTCATGAAAGAGTGATGAAGGAAGGGGAGAAAAATCATATCATGGAAGTTGTCAATCTTGCAAATAGATGTTCAGAGTTGAATGGAAAGAGACAACCAACTACGAAAGAAGTCACATTAGAATTAGAAAGTATTCGAAAATTGGAAGGAAAGTCAAATGCACAAGAAAGACATAATGAACTTGTTAGAAGTGAAGACTATCAATCTTGGGATGATTATTCTACTATCTTAGAAATAAGGTCACTAAGTAGTAGAATACCAACCTTGGAAGATATTCATATTCGTACCATATAA 912 0.3454 MKVLLRWKKPITLLSSEEAKGLASYFIKCVEQDFVFDIIHERVMKEGEKNHIMEVVNLANRCFELNGKTRPTTKEVTLELENGEAFEFMKLKGVGEGTHNFNMKRVIGKVGQATIYKVARALFYLHSAASQPIYHKDIKSINILLDEKYRAKVANFGTFRMISSDVTHLTTVVQGKKPITLLSLEEAKGLTSYFIKCVQQDFVFDIIHERVMKEGEKNHIMEVVNLANRCSELNGKRQPTTKEVTLELESIRKLEGKSNAQERHNELVRSEDYQSWDDYSTILEIRSLSSRIPTLEDIHIRTI 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01742 303 Gene3D Transferase(Phosphotransferase) domain 1 109 172 - -
Phco8g01742 303 Gene3D Transferase(Phosphotransferase) domain 1 1 83 - -
Phco8g01742 303 Pfam Protein kinase domain 110 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01742 303 Gene3D Transferase(Phosphotransferase) domain 1 173 277 - -
Phco8g01742 303 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 118 175 IPR045274 GO:0007166
Phco8g01742 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Phco8g01742 303 SUPERFAMILY Protein kinase-like (PK-like) 114 252 IPR011009 -
Phco8g01742 303 ProSiteProfiles Protein kinase domain profile. 1 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01742 Phco-Chr8 18050761 18053983 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phco8g01742 Pkinase 5.8e-09 CL0016