Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01666 ATGCTTGGGATTTCCATTCCCCTTATCGACACTGGTCAGAGACACGCACCCACACACCCTCTCCCCCGCAAACTCTCTCTCACACTAACTGTGGCGTTTCTTGAAACCCGAAACGTTTCGCTTTTCCACACCATAAAACCAGCAACCGCTCCAAACCTTCACTCTCTCTCAATCCTCCGCTACTGCGCCATGGCTGAGCGCCGCAGCCCCCAAGCTCTCCCAGAGCCACACCCCAAGCCAAACGATTCTGACCGAGAACCGCACGACGCCAACCAAACACAACGACTCACCGAATCGCCCTCCGCCGCCGAGTCGCAGCGCGGCGAGTTACGGAGTTCTGACGACCGTCGTACGGAGTCCAATTTAGAAACCCTAGGCGGTGCTGCTACCTCTTCGGTTCAAACCCTTGCTGTGCAGGACCATCGCAGTGACGATTTGCAAGGGAGCTCTGCTGCGTCGAATTCCAGTGGCAAAGCCGAAAGTAAGGAGACAGTTGCACCTCCTGAAAAAGAAATTATTCAAAGTGGAGCAGCCCAGCCACTTCCAACTCAGACAAATCGGCTTCAGCTGTCTGTGTGTTCAACTCCATTGTCTGAACCACCACCAACTTCTGTTACACAATCTTTATCATCAGTTTCTAGTCCAACTGCACCAAAACAAAAATTATCTACTCCAAAGGTCAATAATGCACATTTGCCAGAAGTAGATAAGAAAAATCCTTCTGGTGGCAAAGCCTTATCTGCTGTTTCTGTTGCGAGGTCATCAGCATCTGATGGATATAATTGGCGGAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACAGGTTTTCGAAGCTATTACAGGTGCACTCATTCAGACTGTTTTGCTAAGAAGATTGAATGCTGTGATCATTCTGGTCATGTGATAGAGATTGTTTATAAAAGTGAGCATAGTCATGATCCACCACGGAAGACTAATTCTCTTAGGGAAAATAAGTTTCTGTCTGCCAGTGAACCTATTGTAGAAAACAGTGTTCCAGATCAGCCTGTCAGACTTCTGAAGGATCCCGATCCATCTATTTCTTCAAAAGAATCTCTACAAGGACCCTGCAGCTCTGATAAGAAACGGCCAAACTCATCTAGTATCAGTGGTAATGGTAAAGTTATTTTGAAAGAGGAACACGTAAATGAGCCAGAGCCGAAAAAAAGAATGAAGAAAGGTGACTTAACAGACATGGATTCTCCTGTAAAACCTGGAAAGAAGCCCAAGTTTGTCATACATGCAGCAGGGGATGTGGGGATATCTGGTGATGGTTACCGATGGCGCAAGTATGGGCAGAAAATGGTGAAGGGAAATCCACATCCCAGGAACTACTATAGATGCACTTCTGCAGGCTGTCCTGTTAGAAAGCACATTGAATCTGCCGTAGATAACTCAGATGCCGTCATTATAACATACAAGGGTGTACATGACCATGACATGCCTGTGCCCAAGAAACGACATGGGCCACCAAGTGCTCCTCTTGTGGCAGCTGCAGCACCCACCTCTATGAACAGTTTACAGGTGAAGAAACCCGATTCCCCACATAACAAGAAAGTTTCTACTCAATGGTCTGTGGACACCGAAGGAGAACTAACTGGGGAAGCCCTGGAACTTGGGGGTGAGAAAGCAATGGAATCAGCTCGAACGCTTCTGAGCATAGGTTTTGAAATTAAACCTTGCTGA 1704 0.473 MLGISIPLIDTGQRHAPTHPLPRKLSLTLTVAFLETRNVSLFHTIKPATAPNLHSLSILRYCAMAERRSPQALPEPHPKPNDSDREPHDANQTQRLTESPSAAESQRGELRSSDDRRTESNLETLGGAATSSVQTLAVQDHRSDDLQGSSAASNSSGKAESKETVAPPEKEIIQSGAAQPLPTQTNRLQLSVCSTPLSEPPPTSVTQSLSSVSSPTAPKQKLSTPKVNNAHLPEVDKKNPSGGKALSAVSVARSSASDGYNWRKYGQKQVKSPTGFRSYYRCTHSDCFAKKIECCDHSGHVIEIVYKSEHSHDPPRKTNSLRENKFLSASEPIVENSVPDQPVRLLKDPDPSISSKESLQGPCSSDKKRPNSSSISGNGKVILKEEHVNEPEPKKRMKKGDLTDMDSPVKPGKKPKFVIHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVDNSDAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPTSMNSLQVKKPDSPHNKKVSTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01666 567 SUPERFAMILY WRKY DNA-binding domain 254 315 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco8g01666 567 MobiDBLite consensus disorder prediction 1 20 - -
Phco8g01666 567 SUPERFAMILY WRKY DNA-binding domain 424 488 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco8g01666 567 MobiDBLite consensus disorder prediction 93 107 - -
Phco8g01666 567 ProSiteProfiles WRKY domain profile. 423 488 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco8g01666 567 MobiDBLite consensus disorder prediction 78 92 - -
Phco8g01666 567 Pfam WRKY DNA -binding domain 258 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco8g01666 567 Pfam WRKY DNA -binding domain 430 485 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco8g01666 567 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 186 515 IPR044810 GO:0003700
Phco8g01666 567 MobiDBLite consensus disorder prediction 123 161 - -
Phco8g01666 567 MobiDBLite consensus disorder prediction 331 415 - -
Phco8g01666 567 MobiDBLite consensus disorder prediction 383 413 - -
Phco8g01666 567 SMART WRKY_cls 256 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco8g01666 567 SMART WRKY_cls 428 487 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco8g01666 567 ProSiteProfiles WRKY domain profile. 251 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco8g01666 567 MobiDBLite consensus disorder prediction 353 379 - -
Phco8g01666 567 FunFam WRKY transcription factor 417 489 - -
Phco8g01666 567 MobiDBLite consensus disorder prediction 193 225 - -
Phco8g01666 567 MobiDBLite consensus disorder prediction 68 168 - -
Phco8g01666 567 Gene3D WRKY domain 243 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco8g01666 567 Gene3D WRKY domain 414 489 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01666 Phco-Chr8 17217748 17226780 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco8g01666 WRKY 2.7e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01666 8 17217748 17226780 Phco8g01666 8 17217748 17226780 ECH