Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01590 ATGAATGAACGTCGAAAAACCATGAAGGTGAGGAGAAAGATCGGGAAGTATGAGGTGGGACGAACTATTGGCGAAGGCACGTTCGCCAAGGTCAAGTTCGCGATAAATTCCGAAACAGGGGAGAGCGTGGCCATTAAAGTTATGGCTAAGACCACCATTCTCCAGCACAGAATGGTTGAGCAGATTAAAAGAGAGATATCCATTATGAAGATTGTCAGGCATCCTAATATAGTTAGATTGCACGAGGTTTTGGCTAGCCAGACCAAGATCTACATAATCCTTGAATTTGTGATGGGAGGGGAACTATATGACAAAATTGTTCAGCAGGGAAGGCTTTCTGAAAATGAATCTAGGCGCTATTTTCAACAACTTATAGACGCTGTTGATCATTGTCATAAAAAGGGTGTGTACCATAGAGACCTGAAGCCAGAAAACCTTCTTCTTGATGCTTATGGAAATTTGAAAGTTTCCGACTTTGGATTGAGTGCATTGACTAAAAAGGGTGTTGGCCTTCTTCACACCACTTGTGGGACCCCAAATTATGTTGCTCCTGAGGTGCTTGGCAATCGAGGATATAATGGTGCAGCAGCTGATGTTTGGTCAAGTGGGGTCATCCTATATGTTCTAATGGCCGGACATCTTCCTTTTGAGGAGCCAGACCTTCCAACACTGTACAGAAGGATCAATGCTGCAGAGTATGTCTGCCCATTCTGGTTTTCTGCTGAGACAAAGTCATTCATACATAAAATTCTAGATCCTAATCCAGAAACAAGGTTGAAAATTGAAGAAATAAGGAAAGATCCATGGTTCCAGAAAAACTATATTCCTGCCAAACTCAGGGAATATGAGCAAGTGAATTTGGATGATGTTCGGGCTGTTTTTGATGATATTGAGGACCAATACGTTGCTGAACAGTCAGAAATTACCGAGGGAGGTCCTTTGATAATGAATGCATTTGAGATGATTGCCTTATCACAAGGGTTGAATCTTTCACCATTGTTTGATAGGCATCAGGATTATGTAAAGCGGCAAACTCGATTTGTCTCTCGTAAACCAGCAAAAGTTATAATTTCTTCTATTGAAGCTGTTGCAGAGTCAATGGGTCTTAAGGTCCATTCTCGCAATTACAAGGTGAGGCTCGAAGGTTTTTCTGCAAACAAGGTTGGGCAATTTGCAGTGGTCTTGGAGGTGTTTGAAGTCGCACCATCCCTTTTCATGGTTGATATTCGGAAAGCAGCTGGGGATACTTTTGACTACCACAAGTTTTACAAGAATTTTTGTACCAAACTCGGAAGCATTATTTGGAGACCGGCAGGGACCATGCCAAATTCTAACACGCTTAAGCAAATGACTATATAA 1359 0.4187 MNERRKTMKVRRKIGKYEVGRTIGEGTFAKVKFAINSETGESVAIKVMAKTTILQHRMVEQIKREISIMKIVRHPNIVRLHEVLASQTKIYIILEFVMGGELYDKIVQQGRLSENESRRYFQQLIDAVDHCHKKGVYHRDLKPENLLLDAYGNLKVSDFGLSALTKKGVGLLHTTCGTPNYVAPEVLGNRGYNGAAADVWSSGVILYVLMAGHLPFEEPDLPTLYRRINAAEYVCPFWFSAETKSFIHKILDPNPETRLKIEEIRKDPWFQKNYIPAKLREYEQVNLDDVRAVFDDIEDQYVAEQSEITEGGPLIMNAFEMIALSQGLNLSPLFDRHQDYVKRQTRFVSRKPAKVIISSIEAVAESMGLKVHSRNYKVRLEGFSANKVGQFAVVLEVFEVAPSLFMVDIRKAAGDTFDYHKFYKNFCTKLGSIIWRPAGTMPNSNTLKQMTI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01590 452 Gene3D Kinase associated domain 1, KA1 316 436 - -
Phco8g01590 452 Gene3D Transferase(Phosphotransferase) domain 1 7 315 - -
Phco8g01590 452 ProSiteProfiles Protein kinase domain profile. 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01590 452 Pfam NAF domain 313 372 IPR004041 GO:0007165
Phco8g01590 452 SMART serkin_6 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01590 452 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Phco8g01590 452 CDD CIPK_C 317 430 - -
Phco8g01590 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Phco8g01590 452 FunFam Non-specific serine/threonine protein kinase 8 96 - -
Phco8g01590 452 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Phco8g01590 452 SUPERFAMILY Protein kinase-like (PK-like) 14 325 IPR011009 -
Phco8g01590 452 FunFam Non-specific serine/threonine protein kinase 310 436 - -
Phco8g01590 452 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 421 - -
Phco8g01590 452 Pfam Protein kinase domain 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01590 452 FunFam Non-specific serine/threonine protein kinase 10 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01590 Phco-Chr8 16280686 16295006 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phco8g01590 Pkinase 1.8e-71 CL0016