Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01578 ATGGCCTTCCTAGCCCTTCTGTTATCACTGTTATGCCTGCTATTTGCAAAACAAGGTGAGAGCATCATAAAGCCAGGGTCTTGGCTCTCTGCTGAACTTGGGAATCATAGTTCATGGGTATCACCTTCTGGCCATTTTGCTTATGGCTTTTACCCACAAGGCAGTGGCTTTGCAGTGGGTATATGGCTGATTAGTGGTGCTAGTCCACCTCAAAAAACTATTGTCTGGACTGCTAACCGTGATAGCTTCCCACTCCCCGCAAATTCAACGTTGAATATCACCACCACTGGTCTGCGGCTTTTCCCGAGTGGGAGAGAAGGCTATGCTCTCATTTCAACTATTAATGCAACTTCAGCATCTATGCTTGATTCTGGCAACTTTGTGCTCTATAGCAACAATGGCAGTACTGTTGTTTGGCAAAGCTTTGATCATCCAACTGACACCTTACTAGGAGGTCAGAGTTTAGTTACCGACGTCAAACTAGTTTCCAGTGTGTCCCAAACAGACCATTCCAGTGGAGCTTTCTTTATCGTCTTGCAAGGAGATGGAAACCTCGTTGCCTATCCCGTGAACAGCGCAGCATCTGCGGATGATGCTTACTGGGCTTCAAAAACTTGGGATAAACCTTTCACACAGCTCAGGCTTAATGTTGCGGGCTCTCTTTGCTTTAATGAGATTACGTGTTTGTATGATAACAGTAGCCCTGGAAAAAAATCAGACAACACAAGTTCAATCTACCGTGCGACATTTGCTGCAGACGGGAACTTTATACTGTATGAGCACCAATTTGAGGACAGTAGTGGTTCTATACATGTCCGAGAACTGTGGAGAACCTCGATTGAAAAATGTCAAATCAAGGGGTTTTGTGGGTTTAACAGTTATTGCTCAAACGTAACAGGCGATGAGGTGTGTGAGTGTTTTCCTGGTTTCGTCCCCTCCAACAGCAGTCGTAAGTCTCAGGACTGCGTACTGGCCTATGCAGAAGATGGTTGCCGAAGCAGTATTTTGTATAATATTACTCAGTTGGAGGATGTGCGTTGGGCTGATAGTACTCCATATTCTGTCATACCGATGAGGAAGAAAGAGTGCGAGAAGTCTTTATTGGATGATTGTGATTGCACGGCGGTATTATATTCAAATGGCAACTGCCAAAAATACGGACTCCCGCTAACATATGGCAGACGGGTTCAAAACTCATCCATGGTGGCACTCTTCAAGAATTCTTTGGGAATCCTCCAAAATCCGATTTCAACCAAGCCTAAATCCAAGGTGGTTACGGATAACAAGAAAAGTCTTATAATGATTCTAGCCTTTACTTTGGGTTCCATTTCATTCTTATCTTTGATATTTGCTGTCTCCATTTTCTTCACTTACAAGCGGAAGCTGCATAAGTATAGAACGTTGTCTGCAAGTGAGAACCTGGGATTTACTGGAGAATGTTCTCTGCGTTCATTTTCTTTCGATGAACTTGTCAAATCCACTGGAGGGTTCACGGAAGAGATAGGGAGAGGATCATTTGGAGCGGTTTACAGAGGCGAAACAGGTGACGACACAAGTATCGCTGTAAAGAGATTGGAGAGAGTTGCTGAGGATGATGGGGAGAGGGAATTTCGAAATGAGATTACTTCCATTGCTCGAACACATCATAGGAATTTGGTTAAGCTCATTGGTTTTTGCATGGATGGAGCTAGGAGTCTTCTTGTTTACGAATACGTAAGAAACGGGTCTCTTGGAAGTCTTCTCTTCAATGATGAGAAACAAATATCCTGGAGAGACAGACTAAAAATTGCATTGGATGTTGCTAGAGGAATCCTTTATCTACACGATGAGTGCGAGGTCCGCATTATCCATTGCAATATAAATCCTGGAAATATACTAATGGATGAAACGTGGACTGCAAAGATCTCTGATTTTGGATTTGCAAAACTACTCAAGTCTGACGATTCAAGAATGAGAAAAGAGAATGATGGGACAAGAAAGTACTCGGCACCTGAATGGCAGAAGGATGCACCAGTGTCCGTAAAATTGGACATTTACAGTTTTGGAATGGTGGTGCTGGAGATTGTGTGCCGCAGACGCAGCATAGAAATGAATGTTTCCTCAGGAGAGGAGATACTTCTGTCCAACTGGGTATATAAATGTTTTGTAGAAGGGCAATTAAATAGGCTTGTGAAGGAGGATGAAGTTGTAGAGTGGAAGACAATGGAAAGAATGGTGAAGGTGGGGTTGTGGTGTGTGCAAGACACTCCTTCTCTTCGTCCTTTGATAAAGAATGTCATCTTGATGTTGGAGGGATTGAAAGATATTCCAATTCCTCCCTCTCCAACCCACCCCATCATTAAGTATTCCTAG 2352 0.4341 MAFLALLLSLLCLLFAKQGESIIKPGSWLSAELGNHSSWVSPSGHFAYGFYPQGSGFAVGIWLISGASPPQKTIVWTANRDSFPLPANSTLNITTTGLRLFPSGREGYALISTINATSASMLDSGNFVLYSNNGSTVVWQSFDHPTDTLLGGQSLVTDVKLVSSVSQTDHSSGAFFIVLQGDGNLVAYPVNSAASADDAYWASKTWDKPFTQLRLNVAGSLCFNEITCLYDNSSPGKKSDNTSSIYRATFAADGNFILYEHQFEDSSGSIHVRELWRTSIEKCQIKGFCGFNSYCSNVTGDEVCECFPGFVPSNSSRKSQDCVLAYAEDGCRSSILYNITQLEDVRWADSTPYSVIPMRKKECEKSLLDDCDCTAVLYSNGNCQKYGLPLTYGRRVQNSSMVALFKNSLGILQNPISTKPKSKVVTDNKKSLIMILAFTLGSISFLSLIFAVSIFFTYKRKLHKYRTLSASENLGFTGECSLRSFSFDELVKSTGGFTEEIGRGSFGAVYRGETGDDTSIAVKRLERVAEDDGEREFRNEITSIARTHHRNLVKLIGFCMDGARSLLVYEYVRNGSLGSLLFNDEKQISWRDRLKIALDVARGILYLHDECEVRIIHCNINPGNILMDETWTAKISDFGFAKLLKSDDSRMRKENDGTRKYSAPEWQKDAPVSVKLDIYSFGMVVLEIVCRRRSIEMNVSSGEEILLSNWVYKCFVEGQLNRLVKEDEVVEWKTMERMVKVGLWCVQDTPSLRPLIKNVILMLEGLKDIPIPPSPTHPIIKYS 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01578 783 ProSiteProfiles Protein kinase domain profile. 495 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01578 783 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524
Phco8g01578 783 SUPERFAMILY EGF/Laminin 280 315 - -
Phco8g01578 783 Gene3D Phosphorylase Kinase; domain 1 471 571 - -
Phco8g01578 783 Pfam D-mannose binding lectin 73 160 IPR001480 -
Phco8g01578 783 Pfam Protein kinase domain 498 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco8g01578 783 Gene3D - 145 287 - -
Phco8g01578 783 Gene3D - 23 143 IPR036426 -
Phco8g01578 783 FunFam Putative receptor-like protein kinase 572 770 - -
Phco8g01578 783 SMART blect_4 30 145 IPR001480 -
Phco8g01578 783 Gene3D Transferase(Phosphotransferase) domain 1 572 772 - -
Phco8g01578 783 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 29 774 - -
Phco8g01578 783 FunFam Serine/threonine-protein kinase 145 271 - -
Phco8g01578 783 PIRSF SRK 1 782 IPR024171 GO:0004674
Phco8g01578 783 FunFam S-receptor-like serine/threonine-protein kinase 464 571 - -
Phco8g01578 783 SUPERFAMILY Protein kinase-like (PK-like) 478 764 IPR011009 -
Phco8g01578 783 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 207 IPR036426 -
Phco8g01578 783 ProSiteProfiles Bulb-type lectin domain profile. 24 200 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01578 Phco-Chr8 16171733 16174084 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phco8g01578 Pkinase 2.2e-43 CL0016