Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g01571 ATGCAAAAAGACATTATTGGCAACTTGGAAGATGATGATGATCAGAGAAGAATGATTAGTAATGATGATTCTAACTTTGTTTTTTCTTCTACTGTTGTTATTCCAAGAGAAGTTGATAATGTTGGTGAATCTGAGAACTATGGCACAAAGAAAGCTCATATAGTATGGTCATCAGATGTTGTGCCAAACAAAATTCTTGAACTCATGAATACGCTTGGTTTGATAAGAAACAATGTTGGTAGTCATTTGCAGAAATATAGAAATGTTTTGAAGGCAAGATCTGATAAAGAAAAACATAGTCAACAACAACTACTACAGAATGAGGTGTCAAGGACTATAACATCTACAAGAGCAGGTCTTTATCTTGGTATCGCAGTTTTGGTCCCAAAAAGAGAGCACCAATCTGTCTCAGACATGCAACTGGATAACCATTTTCATGCAGAACAAGCTTTGGTTTTGGCACATGGTTACCCATTCACTACCTATCCCAACACTGTTATTCCCCAAAATTTTCCACACTCCATTGGGACTCTAGATGATGCATCTACACATGGACTATGGTCTTCATATAATACAGTGTTTGCTGAAAATCAAGCTATGTTGCAGAGAAACAATGACACATTGCAGCAGCAACAACAAATGCATTTTATTTTGTAA 657 0.3623 MQKDIIGNLEDDDDQRRMISNDDSNFVFSSTVVIPREVDNVGESENYGTKKAHIVWSSDVVPNKILELMNTLGLIRNNVGSHLQKYRNVLKARSDKEKHSQQQLLQNEVSRTITSTRAGLYLGIAVLVPKREHQSVSDMQLDNHFHAEQALVLAHGYPFTTYPNTVIPQNFPHSIGTLDDASTHGLWSSYNTVFAENQAMLQRNNDTLQQQQQMHFIL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g01571 218 Gene3D - 37 92 - -
Phco8g01571 218 NCBIfam myb-like DNA-binding domain, SHAQKYF class 59 88 IPR006447 GO:0003677
Phco8g01571 218 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 60 211 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g01571 Phco-Chr8 16131164 16132538 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco8g01571 None None None